Cow genome map


           Conread name:
           rnje10c_n3.y1
        

               Conread position:
               1-671
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 85
               

               Conread position:
               2-239
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               103, 84
               

               Conread position:
               2-327
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               146, 256
               

               Conread position:
               2-343
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               248
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               146, 257
               

               Conread position:
               2-367
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               146, 41
               

               Conread position:
               2-368
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               75, 9
               

               Conread position:
               2-370
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               146, 76
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-380
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               101, 88
               

               Conread position:
               2-383
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               278
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               143, 25
               

               Conread position:
               2-403
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               286
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               146, 257
               

               Conread position:
               2-418
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 71
               

               Conread position:
               2-418
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               20, 97
               

               Conread position:
               2-419
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 257
               

               Conread position:
               2-427
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 32
               

               Conread position:
               2-429
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 239
               

               Conread position:
               2-442
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-452
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               312
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               140, 124
               

               Conread position:
               2-459
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 86
               

               Conread position:
               2-460
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 32
               

               Conread position:
               2-460
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 32
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 134
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 457
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 67
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               324
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               146, 27
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 257
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 257
               

               Conread position:
               2-653
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 61
               

               Conread position:
               2-653
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 253
               

               Conread position:
               2-660
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-663
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 581
               

               Conread position:
               3-660
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 57
               

               Conread position:
               4-412
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 55
               

               Conread position:
               5-469
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 233
               

               Conread position:
               6-442
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               312
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               89, 260
               

               Conread position:
               11-422
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               286
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               136, 52
               

               Conread position:
               18-310
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               124, 139
               

               Conread position:
               18-376
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-378
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               18-400
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               271
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-404
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               273
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-414
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-418
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               286
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               129, 60
               

               Conread position:
               18-419
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               285
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               88, 45
               

               Conread position:
               18-421
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               55, 231
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               103, 48
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 359
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               279
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-423
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-430
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               290
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               87, 40
               

               Conread position:
               18-443
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 70
               

               Conread position:
               18-455
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 351
               

               Conread position:
               18-455
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-460
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 16
               

               Conread position:
               18-460
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-460
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               308
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-460
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               302
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               90, 79
               

               Conread position:
               18-468
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 17
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 284
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               314
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               130, 241
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               314
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               129, 359
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 251
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 241
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 206
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 85
               

               Conread position:
               18-538
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 250
               

               Conread position:
               18-573
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-671
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 77
               

               Conread position:
               21-422
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 76
               

               Conread position:
               21-422
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 76
               

               Conread position:
               21-469
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               309
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               126, 286
               

               Conread position:
               22-325
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               166, 36
               

               Conread position:
               22-422
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               85, 75
               

               Conread position:
               22-423
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 75
               

               Conread position:
               22-469
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 75
               

               Conread position:
               23-653
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 191
               

               Conread position:
               35-422
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               67, 51
               

               Conread position:
               35-443
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 206
               

               Conread position:
               35-469
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               304
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               112, 220
               

               Conread position:
               35-668
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               74-429
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               258
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               69, 150
               

               Conread position:
               78-668
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               110-428
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               34, 56
               

               Conread position:
               119-352
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 117
               

               Conread position:
               149-427
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               70, 14
               

               Conread position:
               158-312
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 93
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               30, 204
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               30, 124
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               30, 204
               

               Conread position:
               158-671
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 68
               

               Conread position:
               168-469
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               168-650
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               318
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               174-388
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 9
               

               Conread position:
               179-662
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               336
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               50, 177
               

               Conread position:
               183-396
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               211, 40
               

               Conread position:
               183-663
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 55
               

               Conread position:
               187-671
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               342
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               143, 162
               
Show alignments to all cow chromosomes.