Cow genome map


           Conread name:
           rnje10c_n3.y1
        

               Conread position:
               2-245
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 78
               

               Conread position:
               2-348
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 251
               

               Conread position:
               2-352
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               161, 81
               

               Conread position:
               2-353
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-354
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               146, 174
               

               Conread position:
               2-366
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               146, 101
               

               Conread position:
               2-372
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-382
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               2-413
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               292
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               146, 88
               

               Conread position:
               2-422
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-422
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 28
               

               Conread position:
               2-427
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               145, 87
               

               Conread position:
               2-437
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-443
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               307
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-443
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 361
               

               Conread position:
               2-460
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 98
               

               Conread position:
               2-460
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 83
               

               Conread position:
               2-463
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 93
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 258
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 257
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-660
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 56
               

               Conread position:
               2-660
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 380
               

               Conread position:
               2-660
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 256
               

               Conread position:
               2-671
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               3-460
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               319
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               116, 94
               

               Conread position:
               3-651
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 131
               

               Conread position:
               4-660
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 256
               

               Conread position:
               5-417
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               67, 53
               

               Conread position:
               15-473
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 48
               

               Conread position:
               18-389
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               18-401
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               269
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               281
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               129, 105
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 108
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               281
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-438
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 240
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 239
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 241
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-482
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               313
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-660
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-671
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 287
               

               Conread position:
               21-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               86, 62
               

               Conread position:
               21-465
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 83
               

               Conread position:
               22-429
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               276
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               111, 79
               

               Conread position:
               22-469
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 234
               

               Conread position:
               25-370
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 201
               

               Conread position:
               35-225
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               107, 42
               

               Conread position:
               35-469
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 221
               

               Conread position:
               35-671
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 343
               

               Conread position:
               37-441
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               296
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               39, 62
               

               Conread position:
               63-305
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               35, 42
               

               Conread position:
               66-458
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               275
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               39, 31
               

               Conread position:
               68-442
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 224
               

               Conread position:
               77-430
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               71, 177
               

               Conread position:
               79-567
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               328
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 16
               

               Conread position:
               100-351
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               103-413
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               45, 16
               

               Conread position:
               147-422
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               150-382
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               38, 94
               

               Conread position:
               158-319
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 95
               

               Conread position:
               158-343
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 68
               

               Conread position:
               158-394
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               30, 157
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               30, 203
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               30, 204
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               30, 204
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               27, 86
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               27, 205
               

               Conread position:
               158-429
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               27, 95
               

               Conread position:
               158-441
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 68
               

               Conread position:
               158-442
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 83
               

               Conread position:
               158-442
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 25
               

               Conread position:
               158-455
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               30, 83
               

               Conread position:
               158-460
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               95, 65
               

               Conread position:
               158-469
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               158-469
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 83
               

               Conread position:
               158-469
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 204
               

               Conread position:
               158-671
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 204
               

               Conread position:
               158-671
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               337
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               16, 85
               

               Conread position:
               159-429
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               30, 75
               

               Conread position:
               168-649
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               171-469
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 191
               

               Conread position:
               177-422
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               217, 67
               

               Conread position:
               180-428
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               183-340
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               183-422
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               70, 208
               

               Conread position:
               183-425
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               75, 105
               

               Conread position:
               183-671
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 375
               

               Conread position:
               185-358
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 157
               

               Conread position:
               186-540
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 55
               

               Conread position:
               198-322
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               60, 43
               
Show alignments to all cow chromosomes.