Cow genome map
| Conread name: | rnje10c_n3.y1 |
| Conread position: | 1-284 |
| Cow position: | chr21:19050908-19051210 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 16, 21 |
| Conread position: | 1-336 |
| Cow position: | chr21:22456779-22456427 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 146, 60 |
| Conread position: | 2-242 |
| Cow position: | chr21:31576088-31575837 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 136, 233 |
| Conread position: | 2-246 |
| Cow position: | chr21:41429013-41428755 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 2-251 |
| Cow position: | chr21:32560062-32560313 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 157, 95 |
| Conread position: | 2-343 |
| Cow position: | chr21:28872709-28872357 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 106 |
| Conread position: | 2-348 |
| Cow position: | chr21:10668437-10668785 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 146, 156 |
| Conread position: | 2-370 |
| Cow position: | chr21:5595239-5594856 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 146, 64 |
| Conread position: | 2-370 |
| Cow position: | chr21:13388711-13388352 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 114, 141 |
| Conread position: | 2-374 |
| Cow position: | chr21:48108270-48108667 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 100, 80 |
| Conread position: | 2-413 |
| Cow position: | chr21:13111221-13111645 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 102 |
| Conread position: | 2-414 |
| Cow position: | chr21:20588607-20588183 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 235 |
| Conread position: | 2-416 |
| Cow position: | chr21:23293578-23294011 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 298 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 73, 260 |
| Conread position: | 2-417 |
| Cow position: | chr21:28259566-28259136 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 290 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 146, 256 |
| Conread position: | 2-417 |
| Cow position: | chr21:39077314-39077735 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 92 |
| Conread position: | 2-419 |
| Cow position: | chr21:22719198-22719631 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 146, 19 |
| Conread position: | 2-419 |
| Cow position: | chr21:34684929-34684516 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 146, 95 |
| Conread position: | 2-422 |
| Cow position: | chr21:29253311-29253727 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 243 |
| Conread position: | 2-422 |
| Cow position: | chr21:44761780-44762212 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 53 |
| Conread position: | 2-423 |
| Cow position: | chr21:36163380-36163818 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 257 |
| Conread position: | 2-426 |
| Cow position: | chr21:25291578-25291143 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 297 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 147, 257 |
| Conread position: | 2-426 |
| Cow position: | chr21:26829661-26830101 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 291 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 154, 84 |
| Conread position: | 2-429 |
| Cow position: | chr21:4940064-4939631 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 87, 104 |
| Conread position: | 2-437 |
| Cow position: | chr21:3765861-3766318 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 306 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 35, 96 |
| Conread position: | 2-442 |
| Cow position: | chr21:2904887-2905345 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-455 |
| Cow position: | chr21:47532609-47532168 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 104 |
| Conread position: | 2-460 |
| Cow position: | chr21:4585771-4586248 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 16 |
| Conread position: | 2-460 |
| Cow position: | chr21:10854162-10853696 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-460 |
| Cow position: | chr21:18285707-18285237 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 76 |
| Conread position: | 2-460 |
| Cow position: | chr21:20243717-20244169 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 84 |
| Conread position: | 2-460 |
| Cow position: | chr21:27124815-27125287 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-460 |
| Cow position: | chr21:31252904-31252418 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-460 |
| Cow position: | chr21:39417977-39417507 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 316 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 104, 95 |
| Conread position: | 2-469 |
| Cow position: | chr21:1196443-1195961 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 102 |
| Conread position: | 2-469 |
| Cow position: | chr21:3253534-3253046 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 155 |
| Conread position: | 2-469 |
| Cow position: | chr21:5021044-5020569 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-469 |
| Cow position: | chr21:27287881-27287399 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 96 |
| Conread position: | 2-469 |
| Cow position: | chr21:30627182-30627656 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 96 |
| Conread position: | 2-471 |
| Cow position: | chr21:33257460-33256977 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 81 |
| Conread position: | 2-471 |
| Cow position: | chr21:33316459-33316945 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 258 |
| Conread position: | 2-482 |
| Cow position: | chr21:3782676-3782181 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 32 |
| Conread position: | 2-573 |
| Cow position: | chr21:78131-78738 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 399 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 65, 236 |
| Conread position: | 2-660 |
| Cow position: | chr21:150052-149352 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-660 |
| Cow position: | chr21:2877936-2878630 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-660 |
| Cow position: | chr21:4559167-4559863 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 376 |
| Conread position: | 2-661 |
| Cow position: | chr21:20262760-20263446 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-663 |
| Cow position: | chr21:28915071-28915767 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 86 |
| Conread position: | 2-668 |
| Cow position: | chr21:12802207-12802888 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 32 |
| Conread position: | 2-671 |
| Cow position: | chr21:31512365-31513074 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 3-427 |
| Cow position: | chr21:471198-470757 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 241 |
| Conread position: | 3-660 |
| Cow position: | chr21:26399880-26400559 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 95 |
| Conread position: | 4-469 |
| Cow position: | chr21:27065696-27066176 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 74 |
| Conread position: | 5-327 |
| Cow position: | chr21:37517791-37518132 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 72, 255 |
| Conread position: | 5-422 |
| Cow position: | chr21:3496603-3497038 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 343 |
| Conread position: | 5-422 |
| Cow position: | chr21:26756820-26757255 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 92 |
| Conread position: | 5-427 |
| Cow position: | chr21:12153708-12153287 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 100, 63 |
| Conread position: | 5-641 |
| Cow position: | chr21:39797380-39796720 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 426 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 142, 78 |
| Conread position: | 5-671 |
| Cow position: | chr21:47978170-47977461 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 372 |
| Conread position: | 11-388 |
| Cow position: | chr21:39486377-39486771 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 136, 248 |
| Conread position: | 14-426 |
| Cow position: | chr21:29556843-29557257 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 134, 41 |
| Conread position: | 17-382 |
| Cow position: | chr21:34181556-34181173 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 90, 80 |
| Conread position: | 18-372 |
| Cow position: | chr21:26854803-26855175 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-377 |
| Cow position: | chr21:9201747-9201367 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 18-405 |
| Cow position: | chr21:25480161-25479756 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-414 |
| Cow position: | chr21:7597381-7597795 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-419 |
| Cow position: | chr21:41795835-41796254 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-422 |
| Cow position: | chr21:4718930-4719352 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-422 |
| Cow position: | chr21:11143960-11144382 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 284 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-422 |
| Cow position: | chr21:16575557-16575979 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-422 |
| Cow position: | chr21:23329453-23329875 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-422 |
| Cow position: | chr21:25598554-25598141 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 290 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-422 |
| Cow position: | chr21:31950303-31949884 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-422 |
| Cow position: | chr21:34899795-34900206 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 277 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 124, 20 |
| Conread position: | 18-422 |
| Cow position: | chr21:47168851-47168428 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-423 |
| Cow position: | chr21:39469875-39470297 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-428 |
| Cow position: | chr21:13303085-13302665 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-428 |
| Cow position: | chr21:28810694-28811127 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 294 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 81, 86 |
| Conread position: | 18-460 |
| Cow position: | chr21:4541297-4541747 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 318 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-460 |
| Cow position: | chr21:23341541-23341082 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-460 |
| Cow position: | chr21:26875481-26875023 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 311 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-460 |
| Cow position: | chr21:36892342-36892801 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-469 |
| Cow position: | chr21:19626820-19627285 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-469 |
| Cow position: | chr21:26633340-26633807 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 359 |
| Conread position: | 18-469 |
| Cow position: | chr21:42917683-42917216 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 359 |
| Conread position: | 18-482 |
| Cow position: | chr21:32396161-32396616 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 87 |
| Conread position: | 18-482 |
| Cow position: | chr21:33832087-33832571 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-606 |
| Cow position: | chr21:13735272-13735900 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-648 |
| Cow position: | chr21:44804696-44805347 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 60 |
| Conread position: | 18-653 |
| Cow position: | chr21:19350971-19351649 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 18-659 |
| Cow position: | chr21:7047295-7047976 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 238 |
| Conread position: | 18-671 |
| Cow position: | chr21:4035404-4036067 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 9 |
| Conread position: | 18-671 |
| Cow position: | chr21:5641948-5642642 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 59 |
| Conread position: | 18-671 |
| Cow position: | chr21:33709610-33710305 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-671 |
| Cow position: | chr21:37924066-37923381 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 359 |
| Conread position: | 21-352 |
| Cow position: | chr21:13276642-13276290 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 126, 9 |
| Conread position: | 21-396 |
| Cow position: | chr21:15584843-15585224 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 84, 76 |
| Conread position: | 21-422 |
| Cow position: | chr21:15545804-15546220 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 329 |
| Conread position: | 21-422 |
| Cow position: | chr21:32238226-32237807 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 76 |
| Conread position: | 21-428 |
| Cow position: | chr21:28908255-28908678 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 13 |
| Conread position: | 21-469 |
| Cow position: | chr21:2514731-2514274 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 319 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 85, 41 |
| Conread position: | 22-428 |
| Cow position: | chr21:29908212-29908617 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 281 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 46, 106 |
| Conread position: | 22-442 |
| Cow position: | chr21:81629-81193 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 61 |
| Conread position: | 22-469 |
| Cow position: | chr21:28477181-28476725 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 75 |
| Conread position: | 22-469 |
| Cow position: | chr21:36505956-36506415 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 312 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 125, 75 |
| Conread position: | 23-422 |
| Cow position: | chr21:39508085-39508501 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 286 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 84, 74 |
| Conread position: | 23-671 |
| Cow position: | chr21:33307845-33307165 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 73 |
| Conread position: | 24-670 |
| Cow position: | chr21:1765652-1766324 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 74 |
| Conread position: | 35-422 |
| Cow position: | chr21:25813557-25813938 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 276 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 112, 31 |
| Conread position: | 35-422 |
| Cow position: | chr21:33728979-33728575 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 223 |
| Conread position: | 39-419 |
| Cow position: | chr21:28028501-28028101 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 252 |
| Conread position: | 39-425 |
| Cow position: | chr21:42527052-42526633 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 101, 47 |
| Conread position: | 48-414 |
| Cow position: | chr21:9851865-9851475 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 50-422 |
| Cow position: | chr21:2503596-2503210 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 98, 144 |
| Conread position: | 60-443 |
| Cow position: | chr21:2293335-2293736 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 198 |
| Conread position: | 63-541 |
| Cow position: | chr21:34591648-34592147 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 327 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 77-341 |
| Cow position: | chr21:40454348-40454628 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 32 |
| Conread position: | 102-406 |
| Cow position: | chr21:26241045-26240750 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 51, 142 |
| Conread position: | 103-343 |
| Cow position: | chr21:28625513-28625267 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 105-341 |
| Cow position: | chr21:34574649-34574887 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 43, 129 |
| Conread position: | 111-426 |
| Cow position: | chr21:6765241-6765557 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 28, 9 |
| Conread position: | 114-390 |
| Cow position: | chr21:28442221-28441943 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 158-331 |
| Cow position: | chr21:34734574-34734398 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 96 |
| Conread position: | 158-352 |
| Cow position: | chr21:29015735-29015928 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 95 |
| Conread position: | 158-418 |
| Cow position: | chr21:10043315-10043054 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 158-422 |
| Cow position: | chr21:30298214-30297947 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 158-422 |
| Cow position: | chr21:30850597-30850330 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 158-422 |
| Cow position: | chr21:32773670-32773403 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 30, 204 |
| Conread position: | 158-422 |
| Cow position: | chr21:38865877-38866144 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 158-422 |
| Cow position: | chr21:42364669-42364404 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 30, 95 |
| Conread position: | 158-426 |
| Cow position: | chr21:42842551-42842825 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 158-442 |
| Cow position: | chr21:4791848-4791563 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 30, 142 |
| Conread position: | 158-449 |
| Cow position: | chr21:33983538-33983835 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 158-459 |
| Cow position: | chr21:46830830-46831133 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 158-465 |
| Cow position: | chr21:48196176-48195878 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 158-469 |
| Cow position: | chr21:48262548-48262239 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 158-662 |
| Cow position: | chr21:32534547-32534042 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 346 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 28, 87 |
| Conread position: | 159-364 |
| Cow position: | chr21:48486039-48486244 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 86 |
| Conread position: | 159-443 |
| Cow position: | chr21:23500941-23501228 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 229 |
| Conread position: | 159-469 |
| Cow position: | chr21:17144422-17144111 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 29, 85 |
| Conread position: | 159-671 |
| Cow position: | chr21:4079748-4079237 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 100 |
| Conread position: | 160-354 |
| Cow position: | chr21:24606813-24606619 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 160-650 |
| Cow position: | chr21:1059994-1059531 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 309 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 98, 88 |
| Conread position: | 160-663 |
| Cow position: | chr21:30313423-30312906 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 337 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 163-596 |
| Cow position: | chr21:37147048-37147502 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 81 |
| Conread position: | 163-669 |
| Cow position: | chr21:48234589-48235102 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 166-321 |
| Cow position: | chr21:30894412-30894254 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 166-370 |
| Cow position: | chr21:18052926-18053136 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 74, 167 |
| Conread position: | 174-422 |
| Cow position: | chr21:4739352-4739101 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 175-425 |
| Cow position: | chr21:49470340-49470098 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 175-660 |
| Cow position: | chr21:30565463-30564959 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 69 |
| Conread position: | 183-422 |
| Cow position: | chr21:6965765-6966004 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 61, 68 |
| Conread position: | 183-428 |
| Cow position: | chr21:27033145-27032900 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 36, 60 |
| Conread position: | 183-465 |
| Cow position: | chr21:23585799-23585519 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 168, 176 |
Show alignments to all cow chromosomes.