Cow genome map

Conread name: rnje10c_n3.y1

Conread position: 1-419
Cow position:
Alignm length: 434
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 46

Conread position: 2-221
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 95

Conread position: 2-329
Cow position:
Alignm length: 346
Alignm identity: 240
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 12

Conread position: 2-363
Cow position:
Alignm length: 377
Alignm identity: 258
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 146, 252

Conread position: 2-368
Cow position:
Alignm length: 388
Alignm identity: 259
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 103, 95

Conread position: 2-397
Cow position:
Alignm length: 398
Alignm identity: 257
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 69, 87

Conread position: 2-411
Cow position:
Alignm length: 429
Alignm identity: 287
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 103, 32

Conread position: 2-417
Cow position:
Alignm length: 435
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 96

Conread position: 2-418
Cow position:
Alignm length: 434
Alignm identity: 286
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 151, 19

Conread position: 2-418
Cow position:
Alignm length: 431
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-422
Cow position:
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 171

Conread position: 2-425
Cow position:
Alignm length: 441
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 234

Conread position: 2-439
Cow position:
Alignm length: 457
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 88

Conread position: 2-443
Cow position:
Alignm length: 466
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 97

Conread position: 2-445
Cow position:
Alignm length: 463
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 32

Conread position: 2-460
Cow position:
Alignm length: 480
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 34

Conread position: 2-469
Cow position:
Alignm length: 490
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-469
Cow position:
Alignm length: 489
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 101

Conread position: 2-469
Cow position:
Alignm length: 489
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-469
Cow position:
Alignm length: 489
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-469
Cow position:
Alignm length: 489
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-469
Cow position:
Alignm length: 488
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-469
Cow position:
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-476
Cow position:
Alignm length: 495
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 257

Conread position: 2-482
Cow position:
Alignm length: 498
Alignm identity: 330
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 103, 95

Conread position: 2-482
Cow position:
Alignm length: 503
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 76

Conread position: 2-482
Cow position:
Alignm length: 501
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 81

Conread position: 2-653
Cow position:
Alignm length: 705
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-660
Cow position:
Alignm length: 694
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 12

Conread position: 2-660
Cow position:
Alignm length: 705
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-660
Cow position:
Alignm length: 705
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 88

Conread position: 2-669
Cow position:
Alignm length: 714
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 95

Conread position: 2-670
Cow position:
Alignm length: 719
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 3-422
Cow position:
Alignm length: 440
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 94

Conread position: 3-482
Cow position:
Alignm length: 504
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 4-469
Cow position:
Alignm length: 488
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 84

Conread position: 5-422
Cow position:
Alignm length: 438
Alignm identity: 292
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 101, 38

Conread position: 6-419
Cow position:
Alignm length: 430
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 37

Conread position: 18-284
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 80

Conread position: 18-365
Cow position:
Alignm length: 367
Alignm identity: 244
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 126, 359

Conread position: 18-373
Cow position:
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 276

Conread position: 18-383
Cow position:
Alignm length: 385
Alignm identity: 260
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 87, 79

Conread position: 18-396
Cow position:
Alignm length: 399
Alignm identity: 263
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 89, 79

Conread position: 18-419
Cow position:
Alignm length: 422
Alignm identity: 284
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 16

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 284
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 414
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 104

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-455
Cow position:
Alignm length: 459
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 359

Conread position: 18-459
Cow position:
Alignm length: 464
Alignm identity: 314
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 87, 79

Conread position: 18-460
Cow position:
Alignm length: 459
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 45

Conread position: 18-460
Cow position:
Alignm length: 462
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-469
Cow position:
Alignm length: 471
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-469
Cow position:
Alignm length: 475
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 243

Conread position: 18-469
Cow position:
Alignm length: 473
Alignm identity: 309
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 89, 79

Conread position: 18-469
Cow position:
Alignm length: 471
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 359

Conread position: 18-469
Cow position:
Alignm length: 474
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-469
Cow position:
Alignm length: 473
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 70

Conread position: 18-469
Cow position:
Alignm length: 474
Alignm identity: 317
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 129, 205

Conread position: 18-643
Cow position:
Alignm length: 654
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 80

Conread position: 18-660
Cow position:
Alignm length: 686
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 358

Conread position: 18-671
Cow position:
Alignm length: 680
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 21-422
Cow position:
Alignm length: 422
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 76

Conread position: 21-422
Cow position:
Alignm length: 422
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 76

Conread position: 21-439
Cow position:
Alignm length: 439
Alignm identity: 292
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 134, 90

Conread position: 21-442
Cow position:
Alignm length: 446
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 76

Conread position: 21-455
Cow position:
Alignm length: 454
Alignm identity: 301
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 126, 67

Conread position: 21-469
Cow position:
Alignm length: 463
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 44

Conread position: 24-327
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 120, 11

Conread position: 25-426
Cow position:
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 334

Conread position: 29-352
Cow position:
Alignm length: 346
Alignm identity: 233
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 75

Conread position: 35-223
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 60

Conread position: 35-440
Cow position:
Alignm length: 431
Alignm identity: 289
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 63

Conread position: 35-461
Cow position:
Alignm length: 446
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 423

Conread position: 35-469
Cow position:
Alignm length: 455
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 62

Conread position: 39-410
Cow position:
Alignm length: 386
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 109, 212

Conread position: 40-343
Cow position:
Alignm length: 323
Alignm identity: 221
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 37, 209

Conread position: 41-413
Cow position:
Alignm length: 389
Alignm identity: 253
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 12, 224

Conread position: 44-669
Cow position:
Alignm length: 660
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 210

Conread position: 57-352
Cow position:
Alignm length: 302
Alignm identity: 200
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 50

Conread position: 63-365
Cow position:
Alignm length: 323
Alignm identity: 223
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 34

Conread position: 73-614
Cow position:
Alignm length: 565
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 75-422
Cow position:
Alignm length: 357
Alignm identity: 237
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 56, 25

Conread position: 103-469
Cow position:
Alignm length: 388
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 155

Conread position: 150-419
Cow position:
Alignm length: 276
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 34

Conread position: 158-328
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 95

Conread position: 158-342
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 161

Conread position: 158-383
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 158-414
Cow position:
Alignm length: 263
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 100, 82

Conread position: 158-422
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 0

Conread position: 158-422
Cow position:
Alignm length: 268
Alignm identity: 196
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 100, 83

Conread position: 158-422
Cow position:
Alignm length: 272
Alignm identity: 202
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 68, 19

Conread position: 158-429
Cow position:
Alignm length: 276
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 68

Conread position: 158-458
Cow position:
Alignm length: 306
Alignm identity: 217
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 30, 83

Conread position: 158-460
Cow position:
Alignm length: 308
Alignm identity: 203
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 30, 204

Conread position: 158-469
Cow position:
Alignm length: 317
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 86

Conread position: 158-469
Cow position:
Alignm length: 316
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 86

Conread position: 158-549
Cow position:
Alignm length: 401
Alignm identity: 257
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 10

Conread position: 158-668
Cow position:
Alignm length: 526
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 79

Conread position: 160-455
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 108

Conread position: 169-380
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 48

Conread position: 169-413
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 172

Conread position: 171-482
Cow position:
Alignm length: 320
Alignm identity: 218
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 73

Conread position: 174-413
Cow position:
Alignm length: 241
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 9

Conread position: 175-636
Cow position:
Alignm length: 480
Alignm identity: 306
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 8, 64

Conread position: 183-469
Cow position:
Alignm length: 289
Alignm identity: 201
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 153, 176

Conread position: 183-472
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 36, 59

Conread position: 185-427
Cow position:
Alignm length: 248
Alignm identity: 165
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 105, 46

Conread position: 185-429
Cow position:
Alignm length: 259
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 172

Show alignments to all cow chromosomes.