Cow genome map

Conread name: rnje10c_n3.y1

Conread position: 1-428
Cow position:
Alignm length: 450
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 52

Conread position: 2-306
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 102

Conread position: 2-320
Cow position:
Alignm length: 337
Alignm identity: 224
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 147, 84

Conread position: 2-383
Cow position:
Alignm length: 403
Alignm identity: 270
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 145, 71

Conread position: 2-416
Cow position:
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 93

Conread position: 2-418
Cow position:
Alignm length: 438
Alignm identity: 288
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 103, 32

Conread position: 2-418
Cow position:
Alignm length: 436
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 255

Conread position: 2-419
Cow position:
Alignm length: 438
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 96

Conread position: 2-422
Cow position:
Alignm length: 450
Alignm identity: 300
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 103, 76

Conread position: 2-422
Cow position:
Alignm length: 430
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 54

Conread position: 2-425
Cow position:
Alignm length: 444
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 181

Conread position: 2-429
Cow position:
Alignm length: 455
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 2-437
Cow position:
Alignm length: 458
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-437
Cow position:
Alignm length: 458
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-437
Cow position:
Alignm length: 458
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 102

Conread position: 2-442
Cow position:
Alignm length: 462
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 42

Conread position: 2-456
Cow position:
Alignm length: 462
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 208

Conread position: 2-460
Cow position:
Alignm length: 479
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 76

Conread position: 2-460
Cow position:
Alignm length: 478
Alignm identity: 316
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 146, 101

Conread position: 2-469
Cow position:
Alignm length: 488
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 256

Conread position: 2-469
Cow position:
Alignm length: 490
Alignm identity: 327
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 9, 17

Conread position: 2-469
Cow position:
Alignm length: 489
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-469
Cow position:
Alignm length: 491
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 348

Conread position: 2-469
Cow position:
Alignm length: 490
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-469
Cow position:
Alignm length: 489
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 67

Conread position: 2-469
Cow position:
Alignm length: 489
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-535
Cow position:
Alignm length: 561
Alignm identity: 370
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 97, 42

Conread position: 2-647
Cow position:
Alignm length: 691
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-660
Cow position:
Alignm length: 700
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 253

Conread position: 2-660
Cow position:
Alignm length: 702
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 375

Conread position: 2-663
Cow position:
Alignm length: 679
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 233

Conread position: 4-671
Cow position:
Alignm length: 708
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 98

Conread position: 5-469
Cow position:
Alignm length: 486
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 254

Conread position: 6-342
Cow position:
Alignm length: 345
Alignm identity: 235
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 142, 21

Conread position: 11-422
Cow position:
Alignm length: 433
Alignm identity: 292
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 94, 23

Conread position: 11-422
Cow position:
Alignm length: 430
Alignm identity: 285
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 96, 86

Conread position: 11-422
Cow position:
Alignm length: 433
Alignm identity: 288
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 96, 86

Conread position: 11-422
Cow position:
Alignm length: 432
Alignm identity: 289
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 95, 86

Conread position: 11-469
Cow position:
Alignm length: 479
Alignm identity: 315
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 136, 366

Conread position: 17-429
Cow position:
Alignm length: 434
Alignm identity: 275
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 82, 13

Conread position: 17-469
Cow position:
Alignm length: 476
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 81

Conread position: 18-370
Cow position:
Alignm length: 367
Alignm identity: 236
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 124, 106

Conread position: 18-383
Cow position:
Alignm length: 385
Alignm identity: 258
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 87, 79

Conread position: 18-388
Cow position:
Alignm length: 377
Alignm identity: 250
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 130, 209

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 284
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 282
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 423
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 423
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-422
Cow position:
Alignm length: 430
Alignm identity: 280
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 89, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 287
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 129, 55

Conread position: 18-422
Cow position:
Alignm length: 415
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 284
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 284
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 129, 241

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-425
Cow position:
Alignm length: 427
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-437
Cow position:
Alignm length: 437
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 51

Conread position: 18-460
Cow position:
Alignm length: 465
Alignm identity: 310
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 88, 79

Conread position: 18-460
Cow position:
Alignm length: 464
Alignm identity: 306
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 129, 206

Conread position: 18-460
Cow position:
Alignm length: 464
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 241

Conread position: 18-469
Cow position:
Alignm length: 473
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 241

Conread position: 18-469
Cow position:
Alignm length: 473
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-469
Cow position:
Alignm length: 473
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-469
Cow position:
Alignm length: 470
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 114

Conread position: 18-469
Cow position:
Alignm length: 465
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 45

Conread position: 18-482
Cow position:
Alignm length: 488
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 86

Conread position: 18-596
Cow position:
Alignm length: 621
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 242

Conread position: 18-659
Cow position:
Alignm length: 690
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-671
Cow position:
Alignm length: 701
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 284

Conread position: 18-671
Cow position:
Alignm length: 700
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 86

Conread position: 18-671
Cow position:
Alignm length: 700
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 244

Conread position: 21-422
Cow position:
Alignm length: 418
Alignm identity: 282
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 86, 42

Conread position: 21-469
Cow position:
Alignm length: 471
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 443

Conread position: 22-364
Cow position:
Alignm length: 358
Alignm identity: 239
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 126, 262

Conread position: 22-373
Cow position:
Alignm length: 372
Alignm identity: 247
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 84, 75

Conread position: 22-422
Cow position:
Alignm length: 419
Alignm identity: 278
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 125, 0

Conread position: 22-422
Cow position:
Alignm length: 417
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 234

Conread position: 22-619
Cow position:
Alignm length: 634
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 75

Conread position: 26-413
Cow position:
Alignm length: 411
Alignm identity: 280
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 79, 71

Conread position: 27-419
Cow position:
Alignm length: 424
Alignm identity: 290
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 9, 362

Conread position: 35-455
Cow position:
Alignm length: 445
Alignm identity: 295
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 71, 62

Conread position: 35-538
Cow position:
Alignm length: 527
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 62

Conread position: 38-469
Cow position:
Alignm length: 453
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 221

Conread position: 38-671
Cow position:
Alignm length: 662
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 221

Conread position: 58-459
Cow position:
Alignm length: 424
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 39

Conread position: 67-422
Cow position:
Alignm length: 382
Alignm identity: 258
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 81, 65

Conread position: 70-428
Cow position:
Alignm length: 360
Alignm identity: 238
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 253, 78

Conread position: 103-380
Cow position:
Alignm length: 282
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 150

Conread position: 103-469
Cow position:
Alignm length: 385
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 157

Conread position: 105-471
Cow position:
Alignm length: 386
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 271

Conread position: 149-422
Cow position:
Alignm length: 275
Alignm identity: 188
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 106, 34

Conread position: 158-342
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 100, 83

Conread position: 158-422
Cow position:
Alignm length: 273
Alignm identity: 190
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 86

Conread position: 158-422
Cow position:
Alignm length: 268
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 230

Conread position: 158-429
Cow position:
Alignm length: 278
Alignm identity: 182
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 158-437
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 97, 65

Conread position: 158-439
Cow position:
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 87

Conread position: 158-442
Cow position:
Alignm length: 289
Alignm identity: 208
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 30, 96

Conread position: 158-449
Cow position:
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 113

Conread position: 158-460
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 68

Conread position: 158-469
Cow position:
Alignm length: 317
Alignm identity: 214
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 30, 86

Conread position: 158-529
Cow position:
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 158-651
Cow position:
Alignm length: 521
Alignm identity: 338
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 86

Conread position: 159-438
Cow position:
Alignm length: 284
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 85

Conread position: 159-482
Cow position:
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 254

Conread position: 160-564
Cow position:
Alignm length: 419
Alignm identity: 267
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 106

Conread position: 163-422
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 207

Conread position: 164-660
Cow position:
Alignm length: 524
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 201

Conread position: 166-636
Cow position:
Alignm length: 490
Alignm identity: 306
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 17

Conread position: 174-422
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 9

Conread position: 177-442
Cow position:
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 64

Conread position: 183-671
Cow position:
Alignm length: 516
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 58

Conread position: 183-671
Cow position:
Alignm length: 516
Alignm identity: 343
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 153, 176

Conread position: 185-671
Cow position:
Alignm length: 499
Alignm identity: 310
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 8

Show alignments to all cow chromosomes.