Cow genome map


           Conread name:
           rnje10c_n3.y1
        

               Conread position:
               1-653
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 251
               

               Conread position:
               2-343
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               146, 255
               

               Conread position:
               2-345
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               139, 353
               

               Conread position:
               2-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               262
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-364
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               71, 15
               

               Conread position:
               2-369
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               275
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 99
               

               Conread position:
               2-419
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 320
               

               Conread position:
               2-422
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 88
               

               Conread position:
               2-422
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 66
               

               Conread position:
               2-437
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 105
               

               Conread position:
               2-442
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               2-459
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 256
               

               Conread position:
               2-460
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               318
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               75, 24
               

               Conread position:
               2-468
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 30
               

               Conread position:
               2-468
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 86
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               324
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 257
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 257
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 215
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               104, 34
               

               Conread position:
               2-471
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 92
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 45
               

               Conread position:
               2-539
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               372
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               142, 69
               

               Conread position:
               2-546
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               370
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               77, 95
               

               Conread position:
               3-460
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 256
               

               Conread position:
               5-423
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               297
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               100, 58
               

               Conread position:
               5-482
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 260
               

               Conread position:
               6-441
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               122, 91
               

               Conread position:
               7-428
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               284
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               125, 48
               

               Conread position:
               11-422
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               290
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               95, 86
               

               Conread position:
               14-455
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 5
               

               Conread position:
               18-354
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-369
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-405
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-417
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 86
               

               Conread position:
               18-419
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 359
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-427
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               81, 40
               

               Conread position:
               18-442
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 37
               

               Conread position:
               18-447
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               129, 62
               

               Conread position:
               18-460
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 239
               

               Conread position:
               18-460
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 225
               

               Conread position:
               18-460
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 87
               

               Conread position:
               18-460
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-463
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               308
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               129, 10
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 359
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-643
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-671
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-671
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 359
               

               Conread position:
               21-671
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 115
               

               Conread position:
               22-417
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               83, 68
               

               Conread position:
               22-660
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 76
               

               Conread position:
               23-422
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 74
               

               Conread position:
               23-660
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 236
               

               Conread position:
               24-422
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               119, 54
               

               Conread position:
               35-422
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               63, 69
               

               Conread position:
               35-469
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               38-353
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 28
               

               Conread position:
               51-349
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 202
               

               Conread position:
               65-422
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               79-422
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               69, 287
               

               Conread position:
               103-480
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 153
               

               Conread position:
               106-440
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               119-413
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               123-389
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               25, 111
               

               Conread position:
               151-422
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               158-378
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               158-403
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 86
               

               Conread position:
               158-416
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               100, 83
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               158-428
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               158-442
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               158-469
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               158-650
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               339
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               27, 74
               

               Conread position:
               158-654
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               345
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               29, 68
               

               Conread position:
               158-663
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 71
               

               Conread position:
               158-671
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               159-469
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 85
               

               Conread position:
               166-364
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               168-429
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               90, 47
               

               Conread position:
               171-669
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 70
               

               Conread position:
               175-422
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               178-422
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               75, 5
               

               Conread position:
               183-366
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               75, 101
               

               Conread position:
               183-376
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               183-428
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               36, 74
               
Show alignments to all cow chromosomes.