Cow genome map


           Conread name:
           rnje10c_n3.y1
        

               Conread position:
               1-460
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 54
               

               Conread position:
               1-534
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               384
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               128, 243
               

               Conread position:
               2-217
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               102, 92
               

               Conread position:
               2-366
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               246
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               103, 61
               

               Conread position:
               2-376
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               145, 56
               

               Conread position:
               2-383
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               146, 239
               

               Conread position:
               2-405
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               288
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-418
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               297
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               146, 61
               

               Conread position:
               2-422
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-426
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               293
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               145, 16
               

               Conread position:
               2-429
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               142, 54
               

               Conread position:
               2-452
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 257
               

               Conread position:
               2-452
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               146, 46
               

               Conread position:
               2-460
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 84
               

               Conread position:
               2-460
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               314
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               146, 84
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 95
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 257
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 266
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 257
               

               Conread position:
               2-653
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 215
               

               Conread position:
               4-382
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               94, 100
               

               Conread position:
               4-383
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               269
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               144, 30
               

               Conread position:
               5-469
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 92
               

               Conread position:
               11-478
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 86
               

               Conread position:
               17-469
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               311
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               89, 80
               

               Conread position:
               17-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               307
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               90, 80
               

               Conread position:
               18-364
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-418
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-419
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-419
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               284
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 80
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               283
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               89, 60
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 41
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 327
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               129, 222
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               284
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-428
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 298
               

               Conread position:
               18-438
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               306
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               130, 26
               

               Conread position:
               18-458
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 52
               

               Conread position:
               18-460
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-460
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               314
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               316
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               129, 29
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 198
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-514
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-541
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-660
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-671
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               21-422
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 238
               

               Conread position:
               21-422
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               283
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               85, 76
               

               Conread position:
               21-482
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               316
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               84, 65
               

               Conread position:
               22-383
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               125, 101
               

               Conread position:
               22-422
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               281
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               85, 75
               

               Conread position:
               22-455
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               299
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               125, 355
               

               Conread position:
               26-662
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 491
               

               Conread position:
               27-419
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               283
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               9, 57
               

               Conread position:
               35-325
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               71, 51
               

               Conread position:
               47-342
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               230
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               96, 213
               

               Conread position:
               65-507
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               318
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               83, 178
               

               Conread position:
               66-540
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               69-397
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 336
               

               Conread position:
               78-469
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               151-469
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               158-368
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               158-383
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               178, 201
               

               Conread position:
               158-419
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               11, 97
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               30, 204
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               158-424
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               30, 83
               

               Conread position:
               158-426
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               29, 195
               

               Conread position:
               158-429
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 84
               

               Conread position:
               158-460
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               30, 204
               

               Conread position:
               158-460
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               30, 204
               

               Conread position:
               158-469
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               30, 205
               

               Conread position:
               158-469
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 86
               

               Conread position:
               158-469
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               30, 204
               

               Conread position:
               159-428
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 75
               

               Conread position:
               165-430
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               93, 74
               

               Conread position:
               168-414
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               168-422
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               168-469
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               20, 194
               

               Conread position:
               180-566
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 43
               

               Conread position:
               183-427
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               155, 76
               
Show alignments to all cow chromosomes.