Cow genome map


           Conread name:
           rnje10c_n3.y1
        

               Conread position:
               2-295
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               53, 145
               

               Conread position:
               2-308
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               142, 253
               

               Conread position:
               2-366
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               110, 76
               

               Conread position:
               2-383
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               272
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               146, 86
               

               Conread position:
               2-415
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               117, 84
               

               Conread position:
               2-419
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 266
               

               Conread position:
               2-419
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 258
               

               Conread position:
               2-422
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               146, 95
               

               Conread position:
               2-422
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-425
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               146, 53
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 84
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 33
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 21
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 95
               

               Conread position:
               2-642
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 242
               

               Conread position:
               2-651
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-660
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 53
               

               Conread position:
               2-660
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-671
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 257
               

               Conread position:
               2-671
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 257
               

               Conread position:
               2-671
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 102
               

               Conread position:
               5-429
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               298
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               87, 109
               

               Conread position:
               18-328
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               87, 45
               

               Conread position:
               18-349
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               130, 237
               

               Conread position:
               18-379
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               25, 17
               

               Conread position:
               18-404
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               275
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               81, 364
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               129, 359
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-458
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 241
               

               Conread position:
               18-460
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               312
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-460
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               309
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               129, 241
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               313
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               315
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 79
               

               Conread position:
               18-482
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               315
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               21-422
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 76
               

               Conread position:
               21-429
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 52
               

               Conread position:
               34-608
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 21
               

               Conread position:
               35-469
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               314
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               70, 23
               

               Conread position:
               37-427
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 51
               

               Conread position:
               37-469
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 60
               

               Conread position:
               38-323
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               67, 59
               

               Conread position:
               39-439
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 30
               

               Conread position:
               48-469
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               289
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               99, 408
               

               Conread position:
               61-663
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 206
               

               Conread position:
               63-591
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 6
               

               Conread position:
               67-440
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               38, 30
               

               Conread position:
               69-670
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               391
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               32, 17
               

               Conread position:
               132-639
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               144-456
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               112, 68
               

               Conread position:
               149-381
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               39, 13
               

               Conread position:
               158-383
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               30, 96
               

               Conread position:
               158-469
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               29, 96
               

               Conread position:
               158-469
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               158-469
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               30, 68
               

               Conread position:
               158-482
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               28, 299
               

               Conread position:
               158-590
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               302
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               60, 110
               

               Conread position:
               158-606
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               320
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               27, 413
               

               Conread position:
               168-422
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               171-418
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               175-634
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 178
               

               Conread position:
               183-422
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               47, 68
               
Show alignments to all cow chromosomes.