Cow genome map

Conread name: rnje10c_n3.y1

Conread position: 1-412
Cow position:
Alignm length: 434
Alignm identity: 274
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 143, 87

Conread position: 1-651
Cow position:
Alignm length: 687
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 322

Conread position: 2-232
Cow position:
Alignm length: 245
Alignm identity: 165
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 143, 0

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 109, 24

Conread position: 2-287
Cow position:
Alignm length: 288
Alignm identity: 206
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 146, 131

Conread position: 2-328
Cow position:
Alignm length: 347
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 146, 240

Conread position: 2-343
Cow position:
Alignm length: 344
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 103, 95

Conread position: 2-344
Cow position:
Alignm length: 359
Alignm identity: 238
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 32

Conread position: 2-359
Cow position:
Alignm length: 379
Alignm identity: 257
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 146, 88

Conread position: 2-364
Cow position:
Alignm length: 384
Alignm identity: 260
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 103, 95

Conread position: 2-368
Cow position:
Alignm length: 377
Alignm identity: 233
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 76, 28

Conread position: 2-407
Cow position:
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 53

Conread position: 2-417
Cow position:
Alignm length: 434
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-419
Cow position:
Alignm length: 443
Alignm identity: 300
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 109, 95

Conread position: 2-419
Cow position:
Alignm length: 437
Alignm identity: 291
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 103, 63

Conread position: 2-422
Cow position:
Alignm length: 445
Alignm identity: 300
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 59, 51

Conread position: 2-422
Cow position:
Alignm length: 442
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-422
Cow position:
Alignm length: 441
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 61

Conread position: 2-430
Cow position:
Alignm length: 455
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 89

Conread position: 2-442
Cow position:
Alignm length: 455
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 252

Conread position: 2-442
Cow position:
Alignm length: 464
Alignm identity: 316
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 53, 59

Conread position: 2-442
Cow position:
Alignm length: 459
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 19

Conread position: 2-455
Cow position:
Alignm length: 475
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-459
Cow position:
Alignm length: 477
Alignm identity: 316
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 146, 239

Conread position: 2-459
Cow position:
Alignm length: 463
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 30

Conread position: 2-460
Cow position:
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 16

Conread position: 2-460
Cow position:
Alignm length: 483
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 57

Conread position: 2-469
Cow position:
Alignm length: 491
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-469
Cow position:
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-473
Cow position:
Alignm length: 493
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-510
Cow position:
Alignm length: 536
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 97

Conread position: 2-580
Cow position:
Alignm length: 599
Alignm identity: 389
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 97, 233

Conread position: 2-649
Cow position:
Alignm length: 691
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 256

Conread position: 2-654
Cow position:
Alignm length: 678
Alignm identity: 418
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 145, 61

Conread position: 2-660
Cow position:
Alignm length: 710
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 32

Conread position: 2-660
Cow position:
Alignm length: 705
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-660
Cow position:
Alignm length: 706
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-660
Cow position:
Alignm length: 707
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 93

Conread position: 2-668
Cow position:
Alignm length: 700
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 17

Conread position: 2-668
Cow position:
Alignm length: 712
Alignm identity: 450
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 104, 52

Conread position: 3-417
Cow position:
Alignm length: 435
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 94

Conread position: 3-475
Cow position:
Alignm length: 493
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 253

Conread position: 4-350
Cow position:
Alignm length: 364
Alignm identity: 240
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 144, 235

Conread position: 4-370
Cow position:
Alignm length: 391
Alignm identity: 260
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 26, 96

Conread position: 4-469
Cow position:
Alignm length: 486
Alignm identity: 327
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 144, 46

Conread position: 4-669
Cow position:
Alignm length: 714
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 93

Conread position: 5-356
Cow position:
Alignm length: 363
Alignm identity: 229
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 102, 92

Conread position: 5-383
Cow position:
Alignm length: 399
Alignm identity: 264
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 101, 92

Conread position: 5-426
Cow position:
Alignm length: 438
Alignm identity: 293
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 99, 80

Conread position: 5-460
Cow position:
Alignm length: 477
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 92

Conread position: 5-469
Cow position:
Alignm length: 482
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 258

Conread position: 5-574
Cow position:
Alignm length: 604
Alignm identity: 377
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 139, 29

Conread position: 5-643
Cow position:
Alignm length: 662
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 58

Conread position: 11-469
Cow position:
Alignm length: 480
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 248

Conread position: 11-469
Cow position:
Alignm length: 479
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 86

Conread position: 17-422
Cow position:
Alignm length: 425
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 80

Conread position: 17-469
Cow position:
Alignm length: 474
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 242

Conread position: 18-302
Cow position:
Alignm length: 302
Alignm identity: 219
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 129, 237

Conread position: 18-353
Cow position:
Alignm length: 357
Alignm identity: 234
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 206

Conread position: 18-370
Cow position:
Alignm length: 372
Alignm identity: 246
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 88, 79

Conread position: 18-380
Cow position:
Alignm length: 383
Alignm identity: 260
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 89, 79

Conread position: 18-397
Cow position:
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 84

Conread position: 18-419
Cow position:
Alignm length: 422
Alignm identity: 275
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 81, 9

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 281
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 129, 359

Conread position: 18-422
Cow position:
Alignm length: 426
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 206

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 89, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-458
Cow position:
Alignm length: 462
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-460
Cow position:
Alignm length: 464
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-460
Cow position:
Alignm length: 460
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 71

Conread position: 18-460
Cow position:
Alignm length: 463
Alignm identity: 306
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 129, 318

Conread position: 18-469
Cow position:
Alignm length: 465
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-469
Cow position:
Alignm length: 476
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-469
Cow position:
Alignm length: 477
Alignm identity: 313
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 126, 109

Conread position: 18-469
Cow position:
Alignm length: 474
Alignm identity: 314
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 59, 96

Conread position: 18-471
Cow position:
Alignm length: 476
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-478
Cow position:
Alignm length: 483
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-671
Cow position:
Alignm length: 701
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 21-419
Cow position:
Alignm length: 423
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 12

Conread position: 21-422
Cow position:
Alignm length: 426
Alignm identity: 284
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 55, 243

Conread position: 21-422
Cow position:
Alignm length: 419
Alignm identity: 280
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 78, 83

Conread position: 21-482
Cow position:
Alignm length: 484
Alignm identity: 316
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 126, 315

Conread position: 21-663
Cow position:
Alignm length: 688
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 238

Conread position: 21-663
Cow position:
Alignm length: 666
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 220

Conread position: 22-422
Cow position:
Alignm length: 421
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 75

Conread position: 23-671
Cow position:
Alignm length: 686
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 86

Conread position: 30-360
Cow position:
Alignm length: 354
Alignm identity: 244
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 33

Conread position: 35-417
Cow position:
Alignm length: 400
Alignm identity: 267
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 113, 230

Conread position: 35-469
Cow position:
Alignm length: 455
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 224

Conread position: 36-662
Cow position:
Alignm length: 661
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 54

Conread position: 37-422
Cow position:
Alignm length: 399
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 22

Conread position: 39-410
Cow position:
Alignm length: 390
Alignm identity: 261
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 109, 47

Conread position: 39-429
Cow position:
Alignm length: 413
Alignm identity: 270
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 109, 16

Conread position: 39-469
Cow position:
Alignm length: 453
Alignm identity: 303
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 108, 49

Conread position: 42-478
Cow position:
Alignm length: 456
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 11

Conread position: 46-460
Cow position:
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 419

Conread position: 48-469
Cow position:
Alignm length: 443
Alignm identity: 294
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 57, 49

Conread position: 51-437
Cow position:
Alignm length: 401
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 46

Conread position: 67-430
Cow position:
Alignm length: 376
Alignm identity: 243
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 166

Conread position: 73-422
Cow position:
Alignm length: 370
Alignm identity: 253
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 7, 187

Conread position: 78-671
Cow position:
Alignm length: 637
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 12

Conread position: 86-663
Cow position:
Alignm length: 616
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 146

Conread position: 103-340
Cow position:
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 156

Conread position: 103-413
Cow position:
Alignm length: 324
Alignm identity: 215
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 150

Conread position: 106-314
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 7

Conread position: 149-422
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 39, 19

Conread position: 151-588
Cow position:
Alignm length: 451
Alignm identity: 299
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 12

Conread position: 158-348
Cow position:
Alignm length: 196
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 158-373
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 13, 198

Conread position: 158-382
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 97, 49

Conread position: 158-388
Cow position:
Alignm length: 235
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 96

Conread position: 158-413
Cow position:
Alignm length: 260
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 86

Conread position: 158-414
Cow position:
Alignm length: 265
Alignm identity: 198
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 30, 149

Conread position: 158-422
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 30, 204

Conread position: 158-422
Cow position:
Alignm length: 268
Alignm identity: 186
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 0

Conread position: 158-422
Cow position:
Alignm length: 267
Alignm identity: 191
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 67

Conread position: 158-422
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 0

Conread position: 158-426
Cow position:
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 86

Conread position: 158-430
Cow position:
Alignm length: 277
Alignm identity: 204
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 30, 87

Conread position: 158-460
Cow position:
Alignm length: 307
Alignm identity: 219
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 30, 68

Conread position: 158-469
Cow position:
Alignm length: 318
Alignm identity: 222
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 86

Conread position: 158-469
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 30, 86

Conread position: 158-469
Cow position:
Alignm length: 317
Alignm identity: 219
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 124

Conread position: 158-631
Cow position:
Alignm length: 487
Alignm identity: 309
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 280, 81

Conread position: 158-660
Cow position:
Alignm length: 533
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 86

Conread position: 158-671
Cow position:
Alignm length: 537
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 159-439
Cow position:
Alignm length: 289
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 227

Conread position: 160-478
Cow position:
Alignm length: 323
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 206

Conread position: 168-422
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 87, 15

Conread position: 168-660
Cow position:
Alignm length: 525
Alignm identity: 353
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 58

Conread position: 169-422
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 18, 56

Conread position: 174-388
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 70

Conread position: 174-469
Cow position:
Alignm length: 299
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 84, 9

Conread position: 182-422
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 152, 119

Conread position: 183-362
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 68, 40

Conread position: 183-409
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 56, 68

Conread position: 183-429
Cow position:
Alignm length: 251
Alignm identity: 169
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 68

Conread position: 217-469
Cow position:
Alignm length: 256
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 34

Show alignments to all cow chromosomes.