Cow genome map
| Conread name: | rnje10c_n3.y1 |
| Conread position: | 1-412 |
| Cow position: | chr28:22412097-22412527 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 143, 87 |
| Conread position: | 1-651 |
| Cow position: | chr28:33281674-33280994 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 322 |
| Conread position: | 2-232 |
| Cow position: | chr28:28766380-28766624 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 2-256 |
| Cow position: | chr28:12704362-12704108 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 109, 24 |
| Conread position: | 2-287 |
| Cow position: | chr28:7724156-7724435 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 146, 131 |
| Conread position: | 2-328 |
| Cow position: | chr28:25767747-25767403 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 146, 240 |
| Conread position: | 2-343 |
| Cow position: | chr28:16387089-16386759 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-344 |
| Cow position: | chr28:25424830-25425180 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 103, 32 |
| Conread position: | 2-359 |
| Cow position: | chr28:24603698-24603323 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 146, 88 |
| Conread position: | 2-364 |
| Cow position: | chr28:13889222-13889603 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-368 |
| Cow position: | chr28:13178169-13178540 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 2-407 |
| Cow position: | chr28:25726897-25726476 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 53 |
| Conread position: | 2-417 |
| Cow position: | chr28:28723991-28723562 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-419 |
| Cow position: | chr28:13372768-13373200 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 109, 95 |
| Conread position: | 2-419 |
| Cow position: | chr28:24671789-24671360 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 103, 63 |
| Conread position: | 2-422 |
| Cow position: | chr28:600417-600849 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 300 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 59, 51 |
| Conread position: | 2-422 |
| Cow position: | chr28:12156452-12156014 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 257 |
| Conread position: | 2-422 |
| Cow position: | chr28:20310707-20310270 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 61 |
| Conread position: | 2-430 |
| Cow position: | chr28:25826341-25826793 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 89 |
| Conread position: | 2-442 |
| Cow position: | chr28:3001093-3001545 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 252 |
| Conread position: | 2-442 |
| Cow position: | chr28:8787079-8786630 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 316 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 53, 59 |
| Conread position: | 2-442 |
| Cow position: | chr28:12429974-12429520 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 19 |
| Conread position: | 2-455 |
| Cow position: | chr28:30098649-30098179 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 257 |
| Conread position: | 2-459 |
| Cow position: | chr28:12406404-12406863 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 316 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 146, 239 |
| Conread position: | 2-459 |
| Cow position: | chr28:13725684-13725231 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 2-460 |
| Cow position: | chr28:29806672-29807143 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 16 |
| Conread position: | 2-460 |
| Cow position: | chr28:34082497-34082974 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 57 |
| Conread position: | 2-469 |
| Cow position: | chr28:5747933-5748416 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-469 |
| Cow position: | chr28:7005801-7005317 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-473 |
| Cow position: | chr28:17663176-17663664 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 257 |
| Conread position: | 2-510 |
| Cow position: | chr28:4957727-4958252 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 97 |
| Conread position: | 2-580 |
| Cow position: | chr28:1837521-1836947 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 389 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 97, 233 |
| Conread position: | 2-649 |
| Cow position: | chr28:5805036-5804352 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 256 |
| Conread position: | 2-654 |
| Cow position: | chr28:7698434-7699097 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 418 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 145, 61 |
| Conread position: | 2-660 |
| Cow position: | chr28:1508647-1507948 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 32 |
| Conread position: | 2-660 |
| Cow position: | chr28:4214664-4213966 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-660 |
| Cow position: | chr28:18516372-18517073 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 257 |
| Conread position: | 2-660 |
| Cow position: | chr28:33640342-33639642 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 93 |
| Conread position: | 2-668 |
| Cow position: | chr28:10280601-10279918 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 17 |
| Conread position: | 2-668 |
| Cow position: | chr28:17744568-17745264 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 450 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 104, 52 |
| Conread position: | 3-417 |
| Cow position: | chr28:11787190-11787615 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 94 |
| Conread position: | 3-475 |
| Cow position: | chr28:34878678-34879159 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 253 |
| Conread position: | 4-350 |
| Cow position: | chr28:30532226-30532587 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 144, 235 |
| Conread position: | 4-370 |
| Cow position: | chr28:23773584-23773971 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 26, 96 |
| Conread position: | 4-469 |
| Cow position: | chr28:19194278-19193810 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 327 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 144, 46 |
| Conread position: | 4-669 |
| Cow position: | chr28:29823956-29823250 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 93 |
| Conread position: | 5-356 |
| Cow position: | chr28:10563164-10562804 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 102, 92 |
| Conread position: | 5-383 |
| Cow position: | chr28:332218-331822 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 101, 92 |
| Conread position: | 5-426 |
| Cow position: | chr28:10589489-10589910 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 293 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 99, 80 |
| Conread position: | 5-460 |
| Cow position: | chr28:2645483-2645013 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 92 |
| Conread position: | 5-469 |
| Cow position: | chr28:3745719-3745253 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 258 |
| Conread position: | 5-574 |
| Cow position: | chr28:21618271-21617678 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 377 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 139, 29 |
| Conread position: | 5-643 |
| Cow position: | chr28:17369819-17369169 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 58 |
| Conread position: | 11-469 |
| Cow position: | chr28:1943532-1944006 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 248 |
| Conread position: | 11-469 |
| Cow position: | chr28:24886623-24886150 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 86 |
| Conread position: | 17-422 |
| Cow position: | chr28:30249884-30249461 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 80 |
| Conread position: | 17-469 |
| Cow position: | chr28:5637808-5637340 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 242 |
| Conread position: | 18-302 |
| Cow position: | chr28:9184684-9184980 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 129, 237 |
| Conread position: | 18-353 |
| Cow position: | chr28:18559219-18559573 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 129, 206 |
| Conread position: | 18-370 |
| Cow position: | chr28:19185980-19185610 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-380 |
| Cow position: | chr28:2422466-2422086 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-397 |
| Cow position: | chr28:13693227-13692840 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 84 |
| Conread position: | 18-419 |
| Cow position: | chr28:20411508-20411091 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 81, 9 |
| Conread position: | 18-422 |
| Cow position: | chr28:5336048-5336470 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 281 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 129, 359 |
| Conread position: | 18-422 |
| Cow position: | chr28:6478975-6478553 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 206 |
| Conread position: | 18-422 |
| Cow position: | chr28:7888328-7888750 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-422 |
| Cow position: | chr28:9710397-9710819 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 79 |
| Conread position: | 18-422 |
| Cow position: | chr28:10870846-10870425 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-422 |
| Cow position: | chr28:12701624-12701202 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-422 |
| Cow position: | chr28:24993244-24992822 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-422 |
| Cow position: | chr28:28934206-28934628 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 286 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-422 |
| Cow position: | chr28:32589456-32589034 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-458 |
| Cow position: | chr28:16597904-16597447 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-460 |
| Cow position: | chr28:9287636-9288095 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-460 |
| Cow position: | chr28:24487638-24488087 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 18-460 |
| Cow position: | chr28:34731488-34731030 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 306 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 129, 318 |
| Conread position: | 18-469 |
| Cow position: | chr28:445156-444698 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-469 |
| Cow position: | chr28:7336743-7336273 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-469 |
| Cow position: | chr28:7830318-7829847 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 313 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 126, 109 |
| Conread position: | 18-469 |
| Cow position: | chr28:25070604-25070137 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 314 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 59, 96 |
| Conread position: | 18-471 |
| Cow position: | chr28:9182626-9182157 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-478 |
| Cow position: | chr28:20966912-20967388 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-671 |
| Cow position: | chr28:23309579-23310275 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 21-419 |
| Cow position: | chr28:23793824-23794241 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 12 |
| Conread position: | 21-422 |
| Cow position: | chr28:5825603-5825184 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 284 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 55, 243 |
| Conread position: | 21-422 |
| Cow position: | chr28:28471771-28471359 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 280 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 21-482 |
| Cow position: | chr28:6319397-6319872 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 316 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 126, 315 |
| Conread position: | 21-663 |
| Cow position: | chr28:5110970-5111652 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 238 |
| Conread position: | 21-663 |
| Cow position: | chr28:18144981-18145632 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 220 |
| Conread position: | 22-422 |
| Cow position: | chr28:25829148-25828730 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 75 |
| Conread position: | 23-671 |
| Cow position: | chr28:3646172-3645505 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 86 |
| Conread position: | 30-360 |
| Cow position: | chr28:34199961-34200299 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 33 |
| Conread position: | 35-417 |
| Cow position: | chr28:13357226-13357619 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 113, 230 |
| Conread position: | 35-469 |
| Cow position: | chr28:13463703-13463253 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 224 |
| Conread position: | 36-662 |
| Cow position: | chr28:29435067-29435724 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 54 |
| Conread position: | 37-422 |
| Cow position: | chr28:23800991-23800599 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 22 |
| Conread position: | 39-410 |
| Cow position: | chr28:5792191-5791817 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 109, 47 |
| Conread position: | 39-429 |
| Cow position: | chr28:27029599-27030000 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 109, 16 |
| Conread position: | 39-469 |
| Cow position: | chr28:23544358-23543912 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 303 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 108, 49 |
| Conread position: | 42-478 |
| Cow position: | chr28:14150719-14150269 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 11 |
| Conread position: | 46-460 |
| Cow position: | chr28:1383723-1384155 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 419 |
| Conread position: | 48-469 |
| Cow position: | chr28:10303564-10303128 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 51-437 |
| Cow position: | chr28:14666855-14666464 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 67-430 |
| Cow position: | chr28:22233792-22234155 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 18, 166 |
| Conread position: | 73-422 |
| Cow position: | chr28:25409333-25408971 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 7, 187 |
| Conread position: | 78-671 |
| Cow position: | chr28:19834795-19834166 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 86-663 |
| Cow position: | chr28:32300920-32301518 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 146 |
| Conread position: | 103-340 |
| Cow position: | chr28:17315067-17314812 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 156 |
| Conread position: | 103-413 |
| Cow position: | chr28:22307841-22307526 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 150 |
| Conread position: | 106-314 |
| Cow position: | chr28:19565662-19565888 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 7 |
| Conread position: | 149-422 |
| Cow position: | chr28:13523289-13523018 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 151-588 |
| Cow position: | chr28:34841079-34840645 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 158-348 |
| Cow position: | chr28:27711891-27711696 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 158-373 |
| Cow position: | chr28:13242703-13242926 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 13, 198 |
| Conread position: | 158-382 |
| Cow position: | chr28:2123156-2122936 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 97, 49 |
| Conread position: | 158-388 |
| Cow position: | chr28:28185190-28184963 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 28, 96 |
| Conread position: | 158-413 |
| Cow position: | chr28:15265780-15266038 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 30, 86 |
| Conread position: | 158-414 |
| Cow position: | chr28:13473212-13472953 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 30, 149 |
| Conread position: | 158-422 |
| Cow position: | chr28:3627615-3627348 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 30, 204 |
| Conread position: | 158-422 |
| Cow position: | chr28:7059832-7059565 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 158-422 |
| Cow position: | chr28:14740997-14740749 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 67 |
| Conread position: | 158-422 |
| Cow position: | chr28:15054758-15054491 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 158-426 |
| Cow position: | chr28:615583-615317 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 86 |
| Conread position: | 158-430 |
| Cow position: | chr28:4069548-4069280 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 30, 87 |
| Conread position: | 158-460 |
| Cow position: | chr28:10162821-10162528 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 158-469 |
| Cow position: | chr28:5211723-5211412 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 30, 86 |
| Conread position: | 158-469 |
| Cow position: | chr28:17392035-17391723 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 30, 86 |
| Conread position: | 158-469 |
| Cow position: | chr28:21896883-21896572 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 30, 124 |
| Conread position: | 158-631 |
| Cow position: | chr28:33768601-33768126 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 280, 81 |
| Conread position: | 158-660 |
| Cow position: | chr28:22254600-22255126 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 86 |
| Conread position: | 158-671 |
| Cow position: | chr28:21104377-21104910 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 86 |
| Conread position: | 159-439 |
| Cow position: | chr28:13607032-13606745 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 227 |
| Conread position: | 160-478 |
| Cow position: | chr28:17030497-17030814 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 206 |
| Conread position: | 168-422 |
| Cow position: | chr28:6473669-6473921 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 168-660 |
| Cow position: | chr28:32785846-32786354 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 353 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 169-422 |
| Cow position: | chr28:25850150-25849896 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 174-388 |
| Cow position: | chr28:5367773-5367990 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 174-469 |
| Cow position: | chr28:3188435-3188726 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 84, 9 |
| Conread position: | 182-422 |
| Cow position: | chr28:10479325-10479561 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 152, 119 |
| Conread position: | 183-362 |
| Cow position: | chr28:7814213-7814041 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 183-409 |
| Cow position: | chr28:24645034-24644808 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 56, 68 |
| Conread position: | 183-429 |
| Cow position: | chr28:34009369-34009121 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 68 |
| Conread position: | 217-469 |
| Cow position: | chr28:20408437-20408186 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 34 |
Show alignments to all cow chromosomes.