Cow genome map

Conread name: rnje10c_n3.y1

Conread position: 1-343
Cow position: chr3:76923651-76923996 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 106, 34

Conread position: 1-469
Cow position: chr3:24585569-24586056 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 96

Conread position: 1-482
Cow position: chr3:2118111-2117606 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 363

Conread position: 2-244
Cow position: chr3:46062989-46062734 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 103, 95

Conread position: 2-285
Cow position: chr3:49649871-49649574 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 96

Conread position: 2-325
Cow position: chr3:56302151-56302489 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 153, 76

Conread position: 2-327
Cow position: chr3:61243036-61242697 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 146, 105

Conread position: 2-363
Cow position: chr3:15379554-15379930 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 103, 88

Conread position: 2-364
Cow position: chr3:48269349-48268970 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 254
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 53

Conread position: 2-366
Cow position: chr3:75157701-75158073 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 75, 96

Conread position: 2-367
Cow position: chr3:18245926-18246308 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 73, 239

Conread position: 2-370
Cow position: chr3:32839080-32838695 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 262
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 26

Conread position: 2-382
Cow position: chr3:19027801-19028190 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 273
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 141, 56

Conread position: 2-388
Cow position: chr3:9665296-9665699 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 276
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 103, 48

Conread position: 2-403
Cow position: chr3:21100460-21100042 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 41

Conread position: 2-407
Cow position: chr3:16005140-16005575 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 294
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 26, 97

Conread position: 2-407
Cow position: chr3:81374594-81375017 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-411
Cow position: chr3:63176997-63176579 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 61

Conread position: 2-413
Cow position: chr3:56160169-56160597 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 285
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 146, 134

Conread position: 2-418
Cow position: chr3:12668350-12667920 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 292
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 146, 53

Conread position: 2-422
Cow position: chr3:14285386-14284953 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 300
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 21, 96

Conread position: 2-422
Cow position: chr3:22234834-22235282 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 298
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 96, 0

Conread position: 2-429
Cow position: chr3:80261200-80261630 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 254

Conread position: 2-439
Cow position: chr3:51597569-51597138 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 297
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 145, 124

Conread position: 2-439
Cow position: chr3:52725617-52726073 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 19

Conread position: 2-442
Cow position: chr3:13352466-13352929 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 322
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 103, 27

Conread position: 2-442
Cow position: chr3:37982708-37983167 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-442
Cow position: chr3:60932921-60932465 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 25

Conread position: 2-447
Cow position: chr3:16115055-16114597 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 44

Conread position: 2-459
Cow position: chr3:13275620-13276098 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-459
Cow position: chr3:49388310-49387832 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 2-459
Cow position: chr3:50921684-50921223 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 229

Conread position: 2-459
Cow position: chr3:74391251-74391722 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 42

Conread position: 2-460
Cow position: chr3:522230-521759 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 92

Conread position: 2-460
Cow position: chr3:18815151-18814689 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 93

Conread position: 2-460
Cow position: chr3:37628540-37628072 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 246

Conread position: 2-466
Cow position: chr3:77472343-77472813 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 102

Conread position: 2-469
Cow position: chr3:2707217-2707699 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-469
Cow position: chr3:10244317-10243834 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-469
Cow position: chr3:11785008-11784538 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 248

Conread position: 2-469
Cow position: chr3:17865086-17864604 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 95

Conread position: 2-469
Cow position: chr3:23216676-23217151 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 76

Conread position: 2-469
Cow position: chr3:31422468-31422952 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-469
Cow position: chr3:38096558-38096074 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-469
Cow position: chr3:42847001-42846519 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-469
Cow position: chr3:46753498-46753021 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 251

Conread position: 2-469
Cow position: chr3:47272221-47272704 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 257

Conread position: 2-469
Cow position: chr3:48603914-48603427 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 56

Conread position: 2-469
Cow position: chr3:56644673-56645156 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-469
Cow position: chr3:57481100-57481562 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 326
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 97, 47

Conread position: 2-469
Cow position: chr3:60184513-60184998 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 254

Conread position: 2-469
Cow position: chr3:64376062-64376536 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 19

Conread position: 2-469
Cow position: chr3:65989564-65989095 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 254

Conread position: 2-469
Cow position: chr3:72633730-72633248 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-469
Cow position: chr3:73450655-73451139 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 258

Conread position: 2-469
Cow position: chr3:75038184-75038667 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-469
Cow position: chr3:75997239-75997714 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 67

Conread position: 2-469
Cow position: chr3:78023790-78024261 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 130

Conread position: 2-480
Cow position: chr3:59865137-59864642 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-482
Cow position: chr3:14466214-14466702 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 331
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 152, 93

Conread position: 2-588
Cow position: chr3:70249779-70250366 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 393
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 28, 78

Conread position: 2-650
Cow position: chr3:3031889-3031218 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 256

Conread position: 2-654
Cow position: chr3:21082516-21081876 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 32

Conread position: 2-660
Cow position: chr3:3836950-3837628 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 457
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 103, 95

Conread position: 2-660
Cow position: chr3:19216555-19215873 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-660
Cow position: chr3:38870223-38869530 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-660
Cow position: chr3:45978157-45977459 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-660
Cow position: chr3:69930179-69930877 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-662
Cow position: chr3:21302941-21303595 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 59

Conread position: 2-663
Cow position: chr3:25690284-25689609 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 76

Conread position: 2-668
Cow position: chr3:24454896-24455568 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 149

Conread position: 2-671
Cow position: chr3:226235-226931 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 122

Conread position: 2-671
Cow position: chr3:17937360-17938056 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 102

Conread position: 2-671
Cow position: chr3:23169581-23170247 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 12

Conread position: 2-671
Cow position: chr3:49541551-49542255 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 81

Conread position: 3-284
Cow position: chr3:45342430-45342136 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 144, 217

Conread position: 3-422
Cow position: chr3:20379063-20379499 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 293
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 105, 91

Conread position: 3-459
Cow position: chr3:30939153-30938680 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 41

Conread position: 3-469
Cow position: chr3:27867311-27866838 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 244

Conread position: 3-469
Cow position: chr3:36874405-36874886 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 134

Conread position: 3-469
Cow position: chr3:56148945-56148467 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 75

Conread position: 4-242
Cow position: chr3:66610353-66610598 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 101, 93

Conread position: 4-429
Cow position: chr3:1483676-1483242 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 302
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 235

Conread position: 4-460
Cow position: chr3:59603456-59602984 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 254

Conread position: 5-368
Cow position: chr3:28922650-28922269 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 252
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 101, 92

Conread position: 5-381
Cow position: chr3:54608358-54608747 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 260
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 140, 254

Conread position: 5-422
Cow position: chr3:4135325-4135762 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 256

Conread position: 5-422
Cow position: chr3:40520285-40520720 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 293
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 101, 92

Conread position: 5-469
Cow position: chr3:44927468-44926988 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 318
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 142, 300

Conread position: 5-591
Cow position: chr3:44365671-44365062 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 405
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 125, 27

Conread position: 11-422
Cow position: chr3:36417388-36416959 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 86

Conread position: 11-437
Cow position: chr3:7245460-7245902 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 93

Conread position: 11-459
Cow position: chr3:6442715-6442252 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 79

Conread position: 11-469
Cow position: chr3:7155158-7155632 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 313
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 97, 86

Conread position: 17-469
Cow position: chr3:28435065-28435524 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 109

Conread position: 17-671
Cow position: chr3:30615299-30615991 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 206

Conread position: 18-370
Cow position: chr3:34037610-34037240 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 87, 79

Conread position: 18-372
Cow position: chr3:1622742-1622370 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 249
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 88, 79

Conread position: 18-373
Cow position: chr3:80741512-80741139 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 245
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 88, 79

Conread position: 18-388
Cow position: chr3:16333058-16332674 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 47

Conread position: 18-401
Cow position: chr3:37020582-37020975 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 264
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 239

Conread position: 18-403
Cow position: chr3:38748022-38747619 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 273
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 87, 79

Conread position: 18-403
Cow position: chr3:45946884-45947286 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 263
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 129, 323

Conread position: 18-404
Cow position: chr3:6884787-6884382 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 272
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 87, 79

Conread position: 18-409
Cow position: chr3:70074462-70074870 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 275
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 87, 79

Conread position: 18-411
Cow position: chr3:52045378-52045789 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 277
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 87, 79

Conread position: 18-414
Cow position: chr3:50217633-50217219 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 79

Conread position: 18-418
Cow position: chr3:19797462-19797879 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 278
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 86, 77

Conread position: 18-420
Cow position: chr3:11736746-11737172 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 296
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 79, 86

Conread position: 18-422
Cow position: chr3:2075422-2075000 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position: chr3:2573169-2572747 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:2833897-2834319 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 359

Conread position: 18-422
Cow position: chr3:6171113-6170691 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:6838674-6838249 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:11418188-11417766 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position: chr3:12932408-12931986 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:14213032-14212610 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-422
Cow position: chr3:15417108-15416686 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:18863079-18862660 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:19881691-19881269 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:19959236-19958814 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 289
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 87

Conread position: 18-422
Cow position: chr3:20795934-20795513 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 283
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 88, 40

Conread position: 18-422
Cow position: chr3:21779136-21779558 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:26892132-26891710 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:30753224-30752803 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 18-422
Cow position: chr3:35043801-35043379 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:35109868-35109446 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 288
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 89, 79

Conread position: 18-422
Cow position: chr3:39232353-39231931 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:41018669-41019094 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 285
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:43525098-43525519 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 282
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 89, 79

Conread position: 18-422
Cow position: chr3:47077971-47078393 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 283
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position: chr3:49610574-49610987 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position: chr3:56484613-56485040 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 292
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:56697479-56697062 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 292
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:58336948-58336526 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-422
Cow position: chr3:65536756-65536334 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position: chr3:76865073-76864651 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-425
Cow position: chr3:55129990-55129570 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 287
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 100, 12

Conread position: 18-429
Cow position: chr3:7739791-7740218 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 283
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 77

Conread position: 18-430
Cow position: chr3:70519663-70520077 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 283
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 126, 37

Conread position: 18-442
Cow position: chr3:18460047-18460496 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 16

Conread position: 18-458
Cow position: chr3:68888931-68889387 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 302
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 129, 206

Conread position: 18-460
Cow position: chr3:12750527-12750082 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 314
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 136, 45

Conread position: 18-460
Cow position: chr3:13034854-13035313 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-460
Cow position: chr3:72174657-72175123 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 366

Conread position: 18-469
Cow position: chr3:2866013-2866480 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-469
Cow position: chr3:16226516-16226050 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 313
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 79

Conread position: 18-469
Cow position: chr3:19942524-19942067 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 317
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 130, 241

Conread position: 18-469
Cow position: chr3:21593923-21593459 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-469
Cow position: chr3:41057601-41057137 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-469
Cow position: chr3:46683475-46683008 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-469
Cow position: chr3:49564658-49564191 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 241

Conread position: 18-469
Cow position: chr3:49604805-49605267 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-469
Cow position: chr3:53047157-53047618 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 82

Conread position: 18-469
Cow position: chr3:64655846-64655385 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-469
Cow position: chr3:65085575-65085109 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-469
Cow position: chr3:75771493-75771960 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-482
Cow position: chr3:13311357-13311844 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 332
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 14

Conread position: 18-482
Cow position: chr3:52149644-52150126 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 359

Conread position: 18-596
Cow position: chr3:47691601-47691012 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 47

Conread position: 18-660
Cow position: chr3:66887551-66888239 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 246

Conread position: 18-660
Cow position: chr3:83767886-83767210 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-664
Cow position: chr3:55374707-55374037 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 79

Conread position: 18-671
Cow position: chr3:302863-302177 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 359

Conread position: 18-671
Cow position: chr3:19884095-19883415 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 47

Conread position: 18-671
Cow position: chr3:34503497-34504177 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-671
Cow position: chr3:36121817-36121121 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 19-460
Cow position: chr3:46506412-46505951 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 317
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 88

Conread position: 21-443
Cow position: chr3:83289311-83289752 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 300
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 126, 43

Conread position: 21-459
Cow position: chr3:44536342-44536804 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 311
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 84, 33

Conread position: 21-460
Cow position: chr3:45675139-45675595 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 437

Conread position: 21-460
Cow position: chr3:48273423-48272964 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 14

Conread position: 21-469
Cow position: chr3:26742238-26742698 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 235

Conread position: 21-540
Cow position: chr3:16716204-16716751 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 366
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 100, 13

Conread position: 21-668
Cow position: chr3:77550594-77549923 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 210

Conread position: 21-671
Cow position: chr3:24265836-24265148 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 355

Conread position: 22-428
Cow position: chr3:57590962-57590552 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 271
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 126, 64

Conread position: 22-439
Cow position: chr3:39215013-39214574 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 168

Conread position: 22-632
Cow position: chr3:63219562-63218926 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 89

Conread position: 22-671
Cow position: chr3:49907397-49908077 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 437
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 125, 353

Conread position: 23-460
Cow position: chr3:40049525-40049072 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 74

Conread position: 24-393
Cow position: chr3:45608482-45608096 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 46

Conread position: 24-426
Cow position: chr3:51256574-51256151 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 289
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 83, 73

Conread position: 26-422
Cow position: chr3:22919154-22918742 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 217

Conread position: 30-423
Cow position: chr3:35919189-35918778 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 274
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 117, 347

Conread position: 34-460
Cow position: chr3:24639026-24638599 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 298
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 9

Conread position: 35-419
Cow position: chr3:80564423-80564018 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 276
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 113, 223

Conread position: 35-465
Cow position: chr3:73763012-73763452 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 220

Conread position: 35-469
Cow position: chr3:579797-579349 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 302
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 109, 342

Conread position: 35-659
Cow position: chr3:42507589-42508251 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 342

Conread position: 35-671
Cow position: chr3:6897446-6896774 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 28

Conread position: 35-671
Cow position: chr3:20780836-20781476 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 62

Conread position: 36-606
Cow position: chr3:52256896-52257504 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 85

Conread position: 37-393
Cow position: chr3:77366091-77366458 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 69, 21

Conread position: 38-422
Cow position: chr3:55246165-55245763 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 59

Conread position: 39-460
Cow position: chr3:7678111-7677674 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 14

Conread position: 39-660
Cow position: chr3:35612767-35612111 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 93

Conread position: 40-425
Cow position: chr3:51478318-51477909 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 272
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 107, 217

Conread position: 40-443
Cow position: chr3:18758786-18759223 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 194

Conread position: 47-422
Cow position: chr3:48528637-48528246 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 262
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 79

Conread position: 63-441
Cow position: chr3:6689410-6689028 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 34

Conread position: 63-580
Cow position: chr3:16657276-16657829 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 483

Conread position: 66-440
Cow position: chr3:46349805-46349428 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 250
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 165, 94

Conread position: 70-671
Cow position: chr3:16883743-16884351 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 169

Conread position: 103-671
Cow position: chr3:2365360-2365951 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 92

Conread position: 104-469
Cow position: chr3:4039380-4039756 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 149

Conread position: 106-643
Cow position: chr3:67466322-67466884 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 41

Conread position: 107-460
Cow position: chr3:29391579-29391937 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 128

Conread position: 110-460
Cow position: chr3:14724642-14724302 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 143, 55

Conread position: 126-422
Cow position: chr3:18253053-18252767 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 22, 39

Conread position: 129-460
Cow position: chr3:68042992-68043322 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 206
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 90, 113

Conread position: 158-353
Cow position: chr3:61466290-61466493 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 158-355
Cow position: chr3:54959219-54959020 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 84

Conread position: 158-373
Cow position: chr3:12785077-12785295 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 158-376
Cow position: chr3:49121065-49121280 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 74

Conread position: 158-383
Cow position: chr3:11334377-11334603 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 30, 87

Conread position: 158-383
Cow position: chr3:73765162-73765390 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 52, 86

Conread position: 158-416
Cow position: chr3:16789332-16789081 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 137, 70

Conread position: 158-422
Cow position: chr3:822603-822870 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 204

Conread position: 158-422
Cow position: chr3:6024372-6024639 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 30, 0

Conread position: 158-422
Cow position: chr3:6529479-6529212 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 30, 204

Conread position: 158-422
Cow position: chr3:18886944-18886677 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 158-422
Cow position: chr3:20074574-20074307 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 30, 0

Conread position: 158-422
Cow position: chr3:30351762-30351495 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 27, 204

Conread position: 158-438
Cow position: chr3:2507155-2507438 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 68

Conread position: 158-442
Cow position: chr3:4017999-4017701 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 158-458
Cow position: chr3:62157087-62156782 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 184
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 26, 171

Conread position: 158-460
Cow position: chr3:34015898-34015594 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 204

Conread position: 158-469
Cow position: chr3:6865136-6864833 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 67

Conread position: 158-469
Cow position: chr3:20999585-20999897 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 30, 86

Conread position: 158-469
Cow position: chr3:56103223-56102914 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 80

Conread position: 158-482
Cow position: chr3:33254376-33254700 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 158-482
Cow position: chr3:40826883-40826556 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 158-596
Cow position: chr3:40004023-40004457 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 308
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 30, 176

Conread position: 158-597
Cow position: chr3:47340650-47341090 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 340

Conread position: 158-660
Cow position: chr3:81101565-81101036 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 158-671
Cow position: chr3:16293430-16293963 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 285

Conread position: 158-671
Cow position: chr3:19824580-19825094 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 87

Conread position: 160-428
Cow position: chr3:26787484-26787224 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 83

Conread position: 160-671
Cow position: chr3:7856906-7856371 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 353
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 84

Conread position: 163-608
Cow position: chr3:68343874-68344315 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 75

Conread position: 165-469
Cow position: chr3:15988417-15988114 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 53

Conread position: 168-375
Cow position: chr3:36570959-36571168 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 76

Conread position: 168-422
Cow position: chr3:12665614-12665357 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 20, 194

Conread position: 168-455
Cow position: chr3:13723235-13723524 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 165

Conread position: 168-556
Cow position: chr3:77697006-77697386 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 259
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 124

Conread position: 169-427
Cow position: chr3:37040757-37040503 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 19, 57

Conread position: 175-458
Cow position: chr3:58129555-58129276 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 71

Conread position: 175-671
Cow position: chr3:47986909-47986387 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 268

Conread position: 177-426
Cow position: chr3:71246067-71245810 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 56, 6

Conread position: 183-369
Cow position: chr3:523663-523481 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 182, 66

Conread position: 183-373
Cow position: chr3:58027241-58027431 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 183-383
Cow position: chr3:52010239-52010439 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 183-422
Cow position: chr3:28471808-28471573 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 153, 104

Conread position: 183-422
Cow position: chr3:36595157-36594918 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 147, 176

Conread position: 183-429
Cow position: chr3:56919525-56919280 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 141, 65

Conread position: 183-469
Cow position: chr3:19794638-19794917 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 243, 40

Conread position: 183-469
Cow position: chr3:64876231-64875948 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 58

Conread position: 183-634
Cow position: chr3:53924217-53924691 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 309
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 52, 194

Conread position: 183-671
Cow position: chr3:55454590-55455086 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 285

Conread position: 183-671
Cow position: chr3:64698252-64697778 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 42

Conread position: 185-460
Cow position: chr3:49931292-49931018 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 231, 255

Show alignments to all cow chromosomes.