Cow genome map

Conread name: rnlu1805b_g12.y1

Conread position: 1-130
Cow position: chr16:48494575-48494447 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 1-131
Cow position: chr16:20069811-20069940 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 54

Conread position: 1-146
Cow position: chr16:32807312-32807171 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 52, 71

Conread position: 1-147
Cow position: chr16:31079112-31078966 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 53

Conread position: 1-149
Cow position: chr16:10504807-10504951 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 1-153
Cow position: chr16:5256975-5257123 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 1-153
Cow position: chr16:32893607-32893754 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 1-155
Cow position: chr16:7505068-7505215 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 1-155
Cow position: chr16:8530904-8530750 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 110, 63

Conread position: 1-155
Cow position: chr16:19052614-19052766 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 1-155
Cow position: chr16:33704787-33704937 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-155
Cow position: chr16:48340715-48340562 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 138, 67

Conread position: 1-156
Cow position: chr16:25839599-25839752 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 1-157
Cow position: chr16:20824456-20824611 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 1-157
Cow position: chr16:31149357-31149509 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 1-157
Cow position: chr16:51500911-51501062 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 54

Conread position: 1-157
Cow position: chr16:56243906-56243754 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 1-159
Cow position: chr16:11135002-11134851 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 1-161
Cow position: chr16:8462097-8461946 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 1-161
Cow position: chr16:30305833-30305681 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 67

Conread position: 1-161
Cow position: chr16:45677957-45678112 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 1-162
Cow position: chr16:40562211-40562367 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 1-171
Cow position: chr16:41697113-41696943 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 132, 67

Conread position: 1-177
Cow position: chr16:496397-496227 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 1-183
Cow position: chr16:19643867-19644047 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 1-183
Cow position: chr16:48095787-48095608 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 63

Conread position: 1-194
Cow position: chr16:11615266-11615074 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 1-211
Cow position: chr16:4059335-4059534 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 1-216
Cow position: chr16:53792841-53792633 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 131, 0

Conread position: 1-229
Cow position: chr16:32781345-32781558 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 1-230
Cow position: chr16:34753981-34753766 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 1-235
Cow position: chr16:8068840-8068624 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 1-235
Cow position: chr16:44239384-44239618 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 143

Conread position: 1-237
Cow position: chr16:31880783-31880558 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 1-238
Cow position: chr16:3114518-3114763 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 132, 69

Conread position: 1-239
Cow position: chr16:7075894-7076116 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 1-239
Cow position: chr16:9905069-9905292 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 1-239
Cow position: chr16:11390307-11390078 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 25, 68

Conread position: 1-239
Cow position: chr16:21370208-21369994 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 1-239
Cow position: chr16:28833822-28834068 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 67

Conread position: 1-239
Cow position: chr16:33054502-33054265 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 182, 67

Conread position: 1-239
Cow position: chr16:47820547-47820770 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 190, 57

Conread position: 1-240
Cow position: chr16:42092409-42092181 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 91, 79

Conread position: 1-240
Cow position: chr16:51598633-51598416 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 193, 43

Conread position: 1-246
Cow position: chr16:4857120-4856896 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 67, 0

Conread position: 1-246
Cow position: chr16:29026187-29026416 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 1-249
Cow position: chr16:29527808-29528045 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 63, 0

Conread position: 1-249
Cow position: chr16:37669758-37669509 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 205, 60

Conread position: 1-250
Cow position: chr16:10592412-10592650 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 222, 52

Conread position: 1-252
Cow position: chr16:8738044-8738276 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 1-255
Cow position: chr16:15945277-15945041 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 0

Conread position: 1-255
Cow position: chr16:17292043-17291770 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 155, 67

Conread position: 1-264
Cow position: chr16:8065672-8065398 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 1-268
Cow position: chr16:47643393-47643659 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 67

Conread position: 2-130
Cow position: chr16:12133840-12133967 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 2-131
Cow position: chr16:12324435-12324563 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 2-132
Cow position: chr16:7626139-7626268 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 2-147
Cow position: chr16:16570895-16571034 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 2-154
Cow position: chr16:33235181-33235032 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 139, 64

Conread position: 2-157
Cow position: chr16:25170373-25170527 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 2-165
Cow position: chr16:5363880-5364040 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 36, 69

Conread position: 2-239
Cow position: chr16:14106622-14106840 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 2-252
Cow position: chr16:17945501-17945748 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 139, 66

Conread position: 3-159
Cow position: chr16:33226557-33226404 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 3-161
Cow position: chr16:39402033-39401880 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 3-183
Cow position: chr16:31561736-31561915 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 169, 65

Conread position: 3-184
Cow position: chr16:13689647-13689823 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 3-239
Cow position: chr16:33198456-33198237 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 3-240
Cow position: chr16:45122016-45122239 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 59, 65

Conread position: 3-243
Cow position: chr16:17460148-17460377 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 37, 66

Conread position: 4-167
Cow position: chr16:7980775-7980933 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 4-235
Cow position: chr16:39172165-39171927 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 133, 64

Conread position: 4-239
Cow position: chr16:24142975-24142756 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 4-239
Cow position: chr16:33869783-33869554 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 5-131
Cow position: chr16:40514499-40514374 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 5-157
Cow position: chr16:41578209-41578360 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 136, 63

Conread position: 5-177
Cow position: chr16:12320204-12320376 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 170, 63

Conread position: 5-231
Cow position: chr16:33645998-33646203 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 6-165
Cow position: chr16:24591836-24591992 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 78, 58

Conread position: 7-271
Cow position: chr16:3304008-3304264 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 40, 49

Conread position: 8-149
Cow position: chr16:17135074-17134935 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 8-180
Cow position: chr16:21040013-21040184 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 8-235
Cow position: chr16:21761984-21761756 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 129, 60

Conread position: 8-239
Cow position: chr16:19003547-19003317 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 60, 0

Conread position: 8-249
Cow position: chr16:3634102-3634351 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 131, 62

Conread position: 8-252
Cow position: chr16:17142920-17143146 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 62

Conread position: 9-257
Cow position: chr16:29608498-29608739 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 232, 8

Conread position: 9-279
Cow position: chr16:30036221-30036469 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 263, 59

Conread position: 11-159
Cow position: chr16:45785726-45785870 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 11-216
Cow position: chr16:15960301-15960106 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 11-235
Cow position: chr16:15905261-15905052 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 11-235
Cow position: chr16:53089357-53089141 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 168, 31

Conread position: 11-239
Cow position: chr16:8273849-8273619 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 132, 60

Conread position: 11-239
Cow position: chr16:13611465-13611243 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 11-239
Cow position: chr16:16597546-16597755 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 11-239
Cow position: chr16:24826062-24826287 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 11-239
Cow position: chr16:45046825-45047044 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 59

Conread position: 11-248
Cow position: chr16:48448712-48448946 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 169, 57

Conread position: 11-248
Cow position: chr16:52389609-52389836 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 11-248
Cow position: chr16:54734228-54734454 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 11-257
Cow position: chr16:26030895-26030662 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 11-271
Cow position: chr16:24403439-24403180 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 131, 33

Conread position: 12-170
Cow position: chr16:20025434-20025588 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 12-232
Cow position: chr16:47304135-47303923 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 15-159
Cow position: chr16:31117621-31117482 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 15-177
Cow position: chr16:7549961-7550123 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 134, 53

Conread position: 15-239
Cow position: chr16:11422294-11422511 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 15-248
Cow position: chr16:12454795-12454568 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 15-250
Cow position: chr16:6319195-6319434 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 54

Conread position: 15-265
Cow position: chr16:4736591-4736342 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 122, 52

Conread position: 16-166
Cow position: chr16:12060410-12060558 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 138, 50

Conread position: 16-239
Cow position: chr16:22842063-22841851 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 16-253
Cow position: chr16:17135721-17135943 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 191, 52

Conread position: 17-174
Cow position: chr16:39616719-39616874 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 122, 45

Conread position: 20-239
Cow position: chr16:29145284-29145059 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 89, 48

Conread position: 21-238
Cow position: chr16:20914818-20914603 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 53

Conread position: 21-240
Cow position: chr16:16025435-16025641 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 0

Conread position: 21-252
Cow position: chr16:9973500-9973273 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 21-254
Cow position: chr16:15415737-15415518 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 45

Conread position: 26-177
Cow position: chr16:20265559-20265412 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 28-248
Cow position: chr16:15203363-15203152 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 32-245
Cow position: chr16:15228910-15229117 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 38

Conread position: 35-264
Cow position: chr16:7611876-7612104 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 106, 33

Conread position: 51-239
Cow position: chr16:30717030-30717232 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 17

Conread position: 52-229
Cow position: chr16:29060407-29060570 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 52-248
Cow position: chr16:52224312-52224111 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 16

Conread position: 52-266
Cow position: chr16:39416805-39416589 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 75, 16

Conread position: 53-235
Cow position: chr16:51915601-51915783 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 86, 15

Conread position: 68-192
Cow position: chr16:18353913-18353791 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 68-224
Cow position: chr16:23187589-23187734 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 68-231
Cow position: chr16:38543814-38543964 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 68-234
Cow position: chr16:47632904-47633065 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 68-237
Cow position: chr16:11922983-11922811 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 68-239
Cow position: chr16:9987023-9986860 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 68-239
Cow position: chr16:12091618-12091456 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 39, 66

Conread position: 68-239
Cow position: chr16:14006074-14005906 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 129, 74

Conread position: 68-239
Cow position: chr16:38905189-38905028 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 68-248
Cow position: chr16:33871692-33871868 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 68-249
Cow position: chr16:1415258-1415074 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 71, 158

Conread position: 68-249
Cow position: chr16:13973111-13972935 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 46

Conread position: 68-250
Cow position: chr16:8206039-8205875 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 68-250
Cow position: chr16:8953638-8953468 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 68-252
Cow position: chr16:14046485-14046303 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 19

Conread position: 68-252
Cow position: chr16:30174486-30174312 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 68-252
Cow position: chr16:53614141-53614332 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 50, 181

Conread position: 68-260
Cow position: chr16:49174329-49174513 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 52, 68

Conread position: 69-274
Cow position: chr16:42777977-42778175 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 70-231
Cow position: chr16:56875617-56875458 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 72

Conread position: 70-239
Cow position: chr16:33523341-33523161 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 151

Conread position: 70-251
Cow position: chr16:5415714-5415536 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 50

Conread position: 70-263
Cow position: chr16:43322896-43323079 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 177, 65

Conread position: 71-239
Cow position: chr16:8795671-8795512 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 71-239
Cow position: chr16:30140977-30140813 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 71-246
Cow position: chr16:11621521-11621348 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 169, 61

Conread position: 71-248
Cow position: chr16:28001185-28001022 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 71-252
Cow position: chr16:13725896-13726079 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 70, 167

Conread position: 74-247
Cow position: chr16:43276069-43276234 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 128, 60

Conread position: 74-264
Cow position: chr16:31159308-31159125 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 167, 11

Conread position: 75-248
Cow position: chr16:51246986-51247150 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 77-239
Cow position: chr16:831680-831528 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 77-239
Cow position: chr16:54342040-54342201 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 30

Conread position: 78-239
Cow position: chr16:4431061-4431214 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 80-248
Cow position: chr16:52363740-52363913 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 81-246
Cow position: chr16:51258218-51258061 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 51

Conread position: 81-268
Cow position: chr16:1829222-1829408 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 52, 149

Conread position: 83-239
Cow position: chr16:20749252-20749407 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 91-250
Cow position: chr16:13770826-13770974 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 122-239
Cow position: chr16:594598-594481 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 85, 9

Conread position: 128-287
Cow position: chr16:51216961-51216802 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 113

Conread position: 130-252
Cow position: chr16:19380357-19380238 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 113, 29

Conread position: 137-239
Cow position: chr16:7727948-7727844 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 141-239
Cow position: chr16:48340295-48340197 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 144-240
Cow position: chr16:7550112-7550208 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 144-240
Cow position: chr16:17903316-17903220 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 144-248
Cow position: chr16:20025627-20025730 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 145-234
Cow position: chr16:13448889-13448978 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 149-239
Cow position: chr16:48130290-48130200 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 77
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 149-267
Cow position: chr16:33631669-33631551 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 151-270
Cow position: chr16:37399725-37399844 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 110, 89

Conread position: 153-239
Cow position: chr16:48095660-48095573 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 158-248
Cow position: chr16:24152404-24152313 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 159-251
Cow position: chr16:35297518-35297611 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 161-242
Cow position: chr16:51143917-51143998 (view UCSC Genome Browser custom track)
Alignm length: 82
Alignm identity: 73
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 162-257
Cow position: chr16:52275016-52274922 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 163-251
Cow position: chr16:13290619-13290710 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 163-283
Cow position: chr16:14242488-14242605 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 0

Show alignments to all cow chromosomes.