Cow genome map


           Conread name:
           rnlu1805b_g12.y1
        

               Conread position:
               1-131
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-133
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               109, 67
               

               Conread position:
               1-149
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               140, 70
               

               Conread position:
               1-168
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               143, 67
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-177
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               161, 67
               

               Conread position:
               1-177
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               79, 67
               

               Conread position:
               1-189
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               129, 67
               

               Conread position:
               1-229
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-231
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               210, 30
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               175, 65
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 67
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               81, 62
               

               Conread position:
               1-246
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               238, 67
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               240, 67
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               51, 69
               

               Conread position:
               1-249
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-261
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 10
               

               Conread position:
               1-268
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               253, 70
               

               Conread position:
               2-131
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               2-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               85, 30
               

               Conread position:
               3-157
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-177
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               3-239
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               128, 64
               

               Conread position:
               4-147
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               5-167
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               5-237
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 66
               

               Conread position:
               5-239
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               106, 65
               

               Conread position:
               7-131
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               7-155
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               8-213
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               196, 42
               

               Conread position:
               8-237
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               189, 60
               

               Conread position:
               8-253
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               11-155
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               103, 57
               

               Conread position:
               11-157
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               11-236
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               11-239
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               111, 57
               

               Conread position:
               11-246
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               11-250
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               11-252
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               11-256
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               145, 35
               

               Conread position:
               11-265
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               131, 37
               

               Conread position:
               12-155
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               12-239
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               12-248
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               173, 23
               

               Conread position:
               15-160
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               15-239
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               128, 51
               

               Conread position:
               16-239
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               180, 52
               

               Conread position:
               16-267
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               21-239
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               22-250
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               25-177
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               40-267
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               52-248
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               67-232
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               67-251
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               68-239
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 70
               

               Conread position:
               68-239
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               68-240
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               68-244
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               95, 69
               

               Conread position:
               68-250
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               68-301
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               93, 69
               

               Conread position:
               70-239
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               74-239
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               74-265
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               75-238
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               77-248
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               78-248
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               78-248
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               63, 52
               

               Conread position:
               91-238
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               103-239
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               126-250
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               128-238
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               128-250
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               137-265
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               138-239
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               141-239
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               141-265
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               106, 114
               

               Conread position:
               141-276
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               142-248
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               142-248
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               144-255
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               144-267
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               144-282
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-263
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               145-265
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               148-248
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               149-252
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               149-266
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               101, 64
               

               Conread position:
               149-271
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               151-285
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               92, 0
               
Show alignments to all cow chromosomes.