Cow genome map
| Conread name: | rnlu1805b_g12.y1 |
| Conread position: | 1-126 |
| Cow position: | chr26:17651955-17652079 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-130 |
| Cow position: | chr26:21637042-21636915 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-131 |
| Cow position: | chr26:5666043-5666173 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 63 |
| Conread position: | 1-150 |
| Cow position: | chr26:23582950-23582804 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:13292514-13292668 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 140, 67 |
| Conread position: | 1-177 |
| Cow position: | chr26:20769846-20770019 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 174, 67 |
| Conread position: | 1-184 |
| Cow position: | chr26:26328908-26329086 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 142, 40 |
| Conread position: | 1-228 |
| Cow position: | chr26:27491503-27491295 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-229 |
| Cow position: | chr26:6337787-6338017 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 141, 27 |
| Conread position: | 1-230 |
| Cow position: | chr26:19446129-19446340 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-238 |
| Cow position: | chr26:5836825-5836607 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-238 |
| Cow position: | chr26:7314617-7314839 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-239 |
| Cow position: | chr26:7212591-7212350 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 52, 71 |
| Conread position: | 1-239 |
| Cow position: | chr26:12940395-12940619 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-239 |
| Cow position: | chr26:13021150-13020906 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 141, 67 |
| Conread position: | 1-248 |
| Cow position: | chr26:7315112-7314873 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 94, 41 |
| Conread position: | 1-248 |
| Cow position: | chr26:12964699-12964461 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-248 |
| Cow position: | chr26:18529783-18530008 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-248 |
| Cow position: | chr26:31137469-31137245 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 99, 66 |
| Conread position: | 1-252 |
| Cow position: | chr26:33241884-33242131 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 67 |
| Conread position: | 1-256 |
| Cow position: | chr26:7687250-7687014 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-271 |
| Cow position: | chr26:6037440-6037181 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 27, 62 |
| Conread position: | 1-308 |
| Cow position: | chr26:32863671-32863365 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 139, 63 |
| Conread position: | 2-238 |
| Cow position: | chr26:34154130-34154380 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 125, 66 |
| Conread position: | 3-266 |
| Cow position: | chr26:107022-107280 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 65 |
| Conread position: | 4-239 |
| Cow position: | chr26:14175280-14175505 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 5-157 |
| Cow position: | chr26:20291693-20291543 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 5-177 |
| Cow position: | chr26:33202071-33201902 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 163, 63 |
| Conread position: | 5-239 |
| Cow position: | chr26:677981-677749 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 7-131 |
| Cow position: | chr26:12145117-12144994 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-239 |
| Cow position: | chr26:31605407-31605644 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 174, 61 |
| Conread position: | 8-231 |
| Cow position: | chr26:33525092-33524860 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 91, 56 |
| Conread position: | 11-168 |
| Cow position: | chr26:8700042-8699883 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 117, 57 |
| Conread position: | 11-223 |
| Cow position: | chr26:2739451-2739242 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 11-238 |
| Cow position: | chr26:24240685-24240890 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 11-239 |
| Cow position: | chr26:25197311-25197090 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 11-241 |
| Cow position: | chr26:22901256-22901040 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 11-248 |
| Cow position: | chr26:32571298-32571541 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 132, 57 |
| Conread position: | 11-252 |
| Cow position: | chr26:19774294-19774051 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 151, 57 |
| Conread position: | 11-252 |
| Cow position: | chr26:30254628-30254394 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 11-287 |
| Cow position: | chr26:6865029-6865315 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 120, 57 |
| Conread position: | 12-153 |
| Cow position: | chr26:28251159-28251302 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 12-269 |
| Cow position: | chr26:33392400-33392637 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 243, 56 |
| Conread position: | 16-254 |
| Cow position: | chr26:34580813-34581041 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 224, 42 |
| Conread position: | 26-239 |
| Cow position: | chr26:15132657-15132852 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 31-160 |
| Cow position: | chr26:28410008-28410136 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 36-239 |
| Cow position: | chr26:26294166-26293968 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 164, 34 |
| Conread position: | 44-248 |
| Cow position: | chr26:13705739-13705548 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 51-298 |
| Cow position: | chr26:30127957-30127725 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 225, 17 |
| Conread position: | 52-239 |
| Cow position: | chr26:4386059-4385865 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 53-247 |
| Cow position: | chr26:33526971-33526780 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 53-252 |
| Cow position: | chr26:32553732-32553937 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 67-248 |
| Cow position: | chr26:31062474-31062646 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 68-233 |
| Cow position: | chr26:9684425-9684581 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 68-261 |
| Cow position: | chr26:32825939-32825750 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 68-271 |
| Cow position: | chr26:33691427-33691222 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 117, 74 |
| Conread position: | 69-236 |
| Cow position: | chr26:10145953-10146105 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 120-274 |
| Cow position: | chr26:2703085-2702933 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 122, 11 |
| Conread position: | 137-239 |
| Cow position: | chr26:16783936-16784038 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 93, 37 |
| Conread position: | 137-250 |
| Cow position: | chr26:32518588-32518699 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 137-266 |
| Cow position: | chr26:10220113-10219984 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 63 |
| Conread position: | 149-235 |
| Cow position: | chr26:13800631-13800717 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-249 |
| Cow position: | chr26:16585556-16585649 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 157-247 |
| Cow position: | chr26:27407751-27407839 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 79 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 157-250 |
| Cow position: | chr26:26330592-26330685 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 84 |
Show alignments to all cow chromosomes.