Cow genome map


           Conread name:
           rnlu1805b_g12.y1
        

               Conread position:
               1-153
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               138, 67
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               1-156
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               133, 63
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               70, 34
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-251
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               130, 67
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               217, 24
               

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 67
               

               Conread position:
               2-151
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               2-153
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               2-157
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               138, 66
               

               Conread position:
               2-161
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               2-177
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               137, 69
               

               Conread position:
               3-155
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               49, 67
               

               Conread position:
               3-157
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 65
               

               Conread position:
               3-157
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               138, 65
               

               Conread position:
               3-158
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               3-238
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               130, 63
               

               Conread position:
               3-250
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-268
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               258, 62
               

               Conread position:
               4-153
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               4-239
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               205, 64
               

               Conread position:
               5-131
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 66
               

               Conread position:
               5-155
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               6-131
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               8-171
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               8-248
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               104, 60
               

               Conread position:
               8-250
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               104, 60
               

               Conread position:
               8-267
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               144, 38
               

               Conread position:
               11-161
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               11-174
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               48, 37
               

               Conread position:
               11-226
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               204, 57
               

               Conread position:
               11-237
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               13, 59
               

               Conread position:
               11-240
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               11-256
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               11-264
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               237, 57
               

               Conread position:
               15-159
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               15-240
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               124, 53
               

               Conread position:
               15-247
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               164, 49
               

               Conread position:
               15-268
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               128, 43
               

               Conread position:
               20-227
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               110, 48
               

               Conread position:
               20-239
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               140, 48
               

               Conread position:
               20-295
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               39, 49
               

               Conread position:
               22-248
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               218, 105
               

               Conread position:
               29-248
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               112, 39
               

               Conread position:
               34-183
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               48-284
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               193, 20
               

               Conread position:
               50-248
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               65, 11
               

               Conread position:
               51-234
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               52-223
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               67-239
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               67-252
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 165
               

               Conread position:
               67-266
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               68-225
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               68-237
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               68-238
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               68-239
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               68-239
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               68-248
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 147
               

               Conread position:
               70-239
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               70-240
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               71-239
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               72-272
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               175, 62
               

               Conread position:
               75-248
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               77-266
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               79-256
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               80-239
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               116-238
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               79, 28
               

               Conread position:
               128-249
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               135-267
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               144-233
               

               Cow position:
               
               

               Alignm length:
               90
               

               Alignm identity:
               77
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               144-238
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               147-248
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 0
               
Show alignments to all cow chromosomes.