Cow genome map

Conread name: rnlu1805b_g12.y1

Conread position: 1-128
Cow position: chr29:35501678-35501552 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 1-157
Cow position: chr29:17109936-17110087 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 1-157
Cow position: chr29:19949285-19949437 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 64

Conread position: 1-157
Cow position: chr29:21666063-21666218 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 1-157
Cow position: chr29:22723577-22723731 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 1-158
Cow position: chr29:36530843-36530999 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 1-159
Cow position: chr29:31943842-31944000 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 84, 63

Conread position: 1-177
Cow position: chr29:23243901-23243728 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 1-239
Cow position: chr29:683514-683264 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 44, 71

Conread position: 1-239
Cow position: chr29:5892821-5893040 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 1-240
Cow position: chr29:26540564-26540345 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 1-246
Cow position: chr29:10156325-10156065 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 127, 39

Conread position: 1-248
Cow position: chr29:749929-749688 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 134, 69

Conread position: 1-252
Cow position: chr29:23220523-23220283 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 1-253
Cow position: chr29:8926485-8926242 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 2-151
Cow position: chr29:22032664-22032515 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 89, 21

Conread position: 2-155
Cow position: chr29:7290753-7290904 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 2-155
Cow position: chr29:26275587-26275733 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 2-174
Cow position: chr29:18085549-18085722 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 139, 68

Conread position: 2-239
Cow position: chr29:26672934-26672705 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 3-126
Cow position: chr29:27329871-27329992 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 3-177
Cow position: chr29:32211088-32210924 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 3-183
Cow position: chr29:25737436-25737257 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 3-237
Cow position: chr29:22714744-22714518 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 3-238
Cow position: chr29:12680134-12680351 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 3-239
Cow position: chr29:23155206-23155429 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 3-240
Cow position: chr29:29324442-29324226 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 60, 0

Conread position: 3-251
Cow position: chr29:28840134-28840379 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 202, 65

Conread position: 3-276
Cow position: chr29:34359000-34358745 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 237, 65

Conread position: 4-157
Cow position: chr29:5063124-5063275 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 4-213
Cow position: chr29:34687814-34688023 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 64

Conread position: 4-238
Cow position: chr29:30681731-30681510 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 4-269
Cow position: chr29:31200237-31200497 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 174, 64

Conread position: 5-155
Cow position: chr29:40117552-40117697 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 5-157
Cow position: chr29:39038289-39038137 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 136, 63

Conread position: 5-164
Cow position: chr29:20770327-20770481 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 5-285
Cow position: chr29:23825230-23824950 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 189
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 205, 63

Conread position: 8-131
Cow position: chr29:22162266-22162144 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 8-239
Cow position: chr29:11562596-11562820 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 11-237
Cow position: chr29:11527803-11527578 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 131, 59

Conread position: 11-238
Cow position: chr29:13373283-13373514 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 63

Conread position: 11-238
Cow position: chr29:36357115-36357321 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 40

Conread position: 11-243
Cow position: chr29:40873997-40874226 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 11-248
Cow position: chr29:13028430-13028653 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 11-257
Cow position: chr29:5995108-5994878 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 11-263
Cow position: chr29:38580966-38581208 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 171, 58

Conread position: 11-274
Cow position: chr29:2263006-2262753 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 12-153
Cow position: chr29:36781317-36781178 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 15-264
Cow position: chr29:11042421-11042661 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 7, 56

Conread position: 16-240
Cow position: chr29:40299029-40298801 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 126, 52

Conread position: 17-235
Cow position: chr29:19125314-19125520 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 18-263
Cow position: chr29:36210139-36210367 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 187, 50

Conread position: 18-296
Cow position: chr29:39329610-39329331 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 165, 50

Conread position: 20-265
Cow position: chr29:28734141-28733890 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 38

Conread position: 32-239
Cow position: chr29:17022157-17022376 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 101, 36

Conread position: 32-301
Cow position: chr29:25288916-25288664 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 214, 36

Conread position: 39-228
Cow position: chr29:33393692-33393871 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 51-228
Cow position: chr29:43080592-43080424 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 51-239
Cow position: chr29:35071058-35070879 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 52-263
Cow position: chr29:19061747-19061546 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 53-239
Cow position: chr29:18579811-18579625 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 101, 15

Conread position: 53-239
Cow position: chr29:40096987-40097175 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 13, 91

Conread position: 53-265
Cow position: chr29:22335201-22335004 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 182, 15

Conread position: 53-274
Cow position: chr29:35630399-35630182 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 21

Conread position: 54-239
Cow position: chr29:30743687-30743516 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 67-209
Cow position: chr29:2533324-2533466 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 19

Conread position: 68-237
Cow position: chr29:32799670-32799511 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 68-239
Cow position: chr29:2730249-2730087 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 68-239
Cow position: chr29:9800692-9800853 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 68-239
Cow position: chr29:17301803-17301965 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 68-239
Cow position: chr29:20579053-20579223 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 49

Conread position: 68-239
Cow position: chr29:26631083-26631243 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 68-239
Cow position: chr29:42771679-42771847 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 68-243
Cow position: chr29:17663719-17663560 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 68-243
Cow position: chr29:34760375-34760203 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 68-248
Cow position: chr29:29940683-29940871 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 68-248
Cow position: chr29:37990957-37990784 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 68-251
Cow position: chr29:30188310-30188125 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 68-260
Cow position: chr29:12859138-12858946 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 49

Conread position: 68-302
Cow position: chr29:42760497-42760733 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 45

Conread position: 69-239
Cow position: chr29:35737284-35737123 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 66

Conread position: 69-239
Cow position: chr29:43311505-43311348 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 69-249
Cow position: chr29:11647137-11647318 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 73

Conread position: 70-239
Cow position: chr29:6844588-6844416 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 70-239
Cow position: chr29:28949017-28949179 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 70-250
Cow position: chr29:30367022-30366850 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 71-248
Cow position: chr29:31942430-31942598 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 74-256
Cow position: chr29:8767927-8768113 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 65

Conread position: 75-239
Cow position: chr29:6034092-6033919 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 80-250
Cow position: chr29:19250386-19250548 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 36, 48

Conread position: 87-248
Cow position: chr29:34600806-34600649 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 88-264
Cow position: chr29:2623444-2623263 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 45, 13

Conread position: 93-279
Cow position: chr29:22705102-22705276 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 181, 49

Conread position: 97-250
Cow position: chr29:19587124-19586974 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 116

Conread position: 128-239
Cow position: chr29:2523266-2523378 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 136-231
Cow position: chr29:6440069-6440164 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 136-283
Cow position: chr29:29176273-29176131 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 105

Conread position: 137-248
Cow position: chr29:9880090-9880198 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 141-267
Cow position: chr29:2720959-2720837 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 141-267
Cow position: chr29:35832857-35832987 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 118

Conread position: 144-253
Cow position: chr29:11139967-11140078 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 157-239
Cow position: chr29:36952200-36952118 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 73
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 161-240
Cow position: chr29:659397-659476 (view UCSC Genome Browser custom track)
Alignm length: 80
Alignm identity: 72
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 161-240
Cow position: chr29:19363824-19363903 (view UCSC Genome Browser custom track)
Alignm length: 80
Alignm identity: 73
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.