Cow genome map
Conread name: | rnlu1830b_e5.y1 |
Conread position: | 1-316 |
Cow position: | chr1:54116445-54116771 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 228 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 49, 100 |
Conread position: | 1-318 |
Cow position: | chr1:8828218-8828550 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 130 |
Conread position: | 1-318 |
Cow position: | chr1:10005785-10005459 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 231 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 49, 74 |
Conread position: | 1-318 |
Cow position: | chr1:70064311-70064628 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 231 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 29, 25 |
Conread position: | 1-320 |
Cow position: | chr1:52054018-52054353 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 25 |
Conread position: | 1-321 |
Cow position: | chr1:30372102-30372427 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 234 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 49, 120 |
Conread position: | 1-321 |
Cow position: | chr1:37542095-37541777 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 230 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 119, 36 |
Conread position: | 1-321 |
Cow position: | chr1:58528469-58528804 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 236 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 49, 112 |
Conread position: | 1-321 |
Cow position: | chr1:88676652-88677002 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 243 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 49, 252 |
Conread position: | 1-321 |
Cow position: | chr1:93857719-93858055 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 130 |
Conread position: | 1-321 |
Cow position: | chr1:99916636-99916972 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 130 |
Conread position: | 1-321 |
Cow position: | chr1:100591575-100591240 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 122 |
Conread position: | 1-321 |
Cow position: | chr1:100888310-100887975 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 129 |
Conread position: | 1-323 |
Cow position: | chr1:17292664-17292329 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 223 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 49, 124 |
Conread position: | 1-324 |
Cow position: | chr1:29461527-29461861 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 94 |
Conread position: | 1-324 |
Cow position: | chr1:85338076-85338397 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 23 |
Conread position: | 1-326 |
Cow position: | chr1:26446353-26446693 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-326 |
Cow position: | chr1:30079140-30079479 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 118 |
Conread position: | 1-326 |
Cow position: | chr1:51488312-51487980 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 233 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 49, 94 |
Conread position: | 1-328 |
Cow position: | chr1:76749191-76748852 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 106 |
Conread position: | 1-329 |
Cow position: | chr1:25120080-25119741 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 234 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 42, 70 |
Conread position: | 1-329 |
Cow position: | chr1:53649849-53650194 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 1-329 |
Cow position: | chr1:68602433-68602089 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 129 |
Conread position: | 1-329 |
Cow position: | chr1:71135100-71135439 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 119 |
Conread position: | 1-330 |
Cow position: | chr1:102431542-102431197 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 120 |
Conread position: | 1-334 |
Cow position: | chr1:51444440-51444790 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 140 |
Conread position: | 1-346 |
Cow position: | chr1:45006171-45006515 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 249 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 46, 140 |
Conread position: | 1-639 |
Cow position: | chr1:51982622-51983284 (view UCSC Genome Browser custom track) |
Alignm length: | 676 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 128 |
Conread position: | 2-320 |
Cow position: | chr1:55780070-55780401 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 15 |
Conread position: | 2-321 |
Cow position: | chr1:61220632-61220964 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 241 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 48, 120 |
Conread position: | 3-321 |
Cow position: | chr1:61203583-61203917 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 118 |
Conread position: | 3-332 |
Cow position: | chr1:31317275-31316931 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 237 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 48, 116 |
Conread position: | 3-355 |
Cow position: | chr1:22727491-22727869 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 6-324 |
Cow position: | chr1:14529256-14528933 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 236 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 43, 69 |
Conread position: | 6-326 |
Cow position: | chr1:7200309-7200637 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 216 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 48, 131 |
Conread position: | 7-317 |
Cow position: | chr1:22481457-22481129 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 7-321 |
Cow position: | chr1:33548198-33547868 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 232 |
Conread position: | 7-355 |
Cow position: | chr1:54477005-54477354 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 47 |
Conread position: | 8-321 |
Cow position: | chr1:64717688-64717359 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 221 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 8-325 |
Cow position: | chr1:58197234-58196917 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 237 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 43, 102 |
Conread position: | 11-327 |
Cow position: | chr1:24580615-24580946 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 7 |
Conread position: | 11-327 |
Cow position: | chr1:88563707-88563385 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 222 |
Conread position: | 16-318 |
Cow position: | chr1:28677270-28677581 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 229 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 34, 75 |
Conread position: | 23-321 |
Cow position: | chr1:79453541-79453227 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 225 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 27, 98 |
Conread position: | 39-342 |
Cow position: | chr1:96193897-96193603 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 229 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 37, 46 |
Conread position: | 46-318 |
Cow position: | chr1:67289868-67290147 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 192 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 74, 29 |
Conread position: | 46-327 |
Cow position: | chr1:76208775-76208487 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 195 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 73, 31 |
Conread position: | 55-313 |
Cow position: | chr1:5013542-5013273 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 197 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 21, 71 |
Conread position: | 60-329 |
Cow position: | chr1:92196238-92196517 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 89 |
Conread position: | 67-330 |
Cow position: | chr1:32563267-32562993 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 195 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 9, 49 |
Conread position: | 89-320 |
Cow position: | chr1:4452796-4452551 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 179 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 15, 74 |
Conread position: | 120-329 |
Cow position: | chr1:19793024-19793243 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 167 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 43, 110 |
Conread position: | 123-321 |
Cow position: | chr1:12057925-12057719 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 156 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 124-318 |
Cow position: | chr1:97076175-97075971 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 151 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 137, 0 |
Conread position: | 126-321 |
Cow position: | chr1:70381083-70380882 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 160 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 141, 52 |
Conread position: | 130-326 |
Cow position: | chr1:68252660-68252863 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 158 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 8, 96 |
Conread position: | 133-329 |
Cow position: | chr1:36235420-36235212 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 147 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 135-328 |
Cow position: | chr1:99278651-99278447 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 146 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 140-329 |
Cow position: | chr1:71081502-71081302 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 157 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 145-332 |
Cow position: | chr1:41736528-41736331 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 140 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 151-321 |
Cow position: | chr1:78796720-78796542 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 137 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 152-326 |
Cow position: | chr1:31238835-31238651 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 135 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 180-318 |
Cow position: | chr1:92433172-92433312 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 74, 84 |
Conread position: | 309-639 |
Cow position: | chr1:89742666-89742324 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 243 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 27, 79 |
Conread position: | 311-562 |
Cow position: | chr1:93858120-93858384 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 196 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 311-637 |
Cow position: | chr1:21523372-21523694 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 93 |
Conread position: | 311-639 |
Cow position: | chr1:7162210-7161870 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 271 |
Conread position: | 311-639 |
Cow position: | chr1:24580989-24581329 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 311-639 |
Cow position: | chr1:72462491-72462826 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 311-639 |
Cow position: | chr1:89766934-89766585 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 284 |
Conread position: | 314-543 |
Cow position: | chr1:71714109-71714350 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 181 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 320-638 |
Cow position: | chr1:86505279-86504954 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 13 |
Conread position: | 323-639 |
Cow position: | chr1:43448410-43448091 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 249 |
Conread position: | 323-639 |
Cow position: | chr1:96135861-96136190 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 201 |
Conread position: | 324-639 |
Cow position: | chr1:95655328-95654997 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 232 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 17, 120 |
Conread position: | 333-639 |
Cow position: | chr1:40310379-40310698 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 229 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 69, 134 |
Conread position: | 333-639 |
Cow position: | chr1:56407952-56408257 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 213 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 69, 185 |
Conread position: | 333-639 |
Cow position: | chr1:59167085-59166768 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 213 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 69, 38 |
Conread position: | 333-639 |
Cow position: | chr1:81925563-81925247 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 223 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 70, 151 |
Conread position: | 333-640 |
Cow position: | chr1:54116861-54117177 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 225 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 71, 281 |
Conread position: | 333-640 |
Cow position: | chr1:59248159-59247841 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 222 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 339-639 |
Cow position: | chr1:37646891-37646584 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 339-639 |
Cow position: | chr1:68951028-68951331 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 219 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 58, 49 |
Conread position: | 341-639 |
Cow position: | chr1:91799606-91799297 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 145 |
Conread position: | 341-639 |
Cow position: | chr1:91888608-91888299 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 267 |
Conread position: | 349-638 |
Cow position: | chr1:101834022-101834320 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 218 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 45, 127 |
Conread position: | 351-562 |
Cow position: | chr1:73702691-73702468 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 170 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 29, 35 |
Show alignments to all cow chromosomes.