Cow genome map


           Conread name:
           rnlu1830b_e5.y1
        

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               49, 100
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               49, 74
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               29, 25
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 25
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               119, 36
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               49, 112
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               49, 252
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 122
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 129
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               49, 124
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 118
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 94
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 106
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               42, 70
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 129
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 119
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 140
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               46, 140
               

               Conread position:
               1-639
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 128
               

               Conread position:
               2-320
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 15
               

               Conread position:
               2-321
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               48, 120
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 118
               

               Conread position:
               3-332
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               48, 116
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               6-324
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               236
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               43, 69
               

               Conread position:
               6-326
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 131
               

               Conread position:
               7-317
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               7-321
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 232
               

               Conread position:
               7-355
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 47
               

               Conread position:
               8-321
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               8-325
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               43, 102
               

               Conread position:
               11-327
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 7
               

               Conread position:
               11-327
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 222
               

               Conread position:
               16-318
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               34, 75
               

               Conread position:
               23-321
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               27, 98
               

               Conread position:
               39-342
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               37, 46
               

               Conread position:
               46-318
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               74, 29
               

               Conread position:
               46-327
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 31
               

               Conread position:
               55-313
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               60-329
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 89
               

               Conread position:
               67-330
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 49
               

               Conread position:
               89-320
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               15, 74
               

               Conread position:
               120-329
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               43, 110
               

               Conread position:
               123-321
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               124-318
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               126-321
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               141, 52
               

               Conread position:
               130-326
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 96
               

               Conread position:
               133-329
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               135-328
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               140-329
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               145-332
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               151-321
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               152-326
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               180-318
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               74, 84
               

               Conread position:
               309-639
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               27, 79
               

               Conread position:
               311-562
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               311-637
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 93
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 271
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 284
               

               Conread position:
               314-543
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               320-638
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 13
               

               Conread position:
               323-639
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 249
               

               Conread position:
               323-639
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 201
               

               Conread position:
               324-639
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               17, 120
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               69, 134
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               69, 185
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               70, 151
               

               Conread position:
               333-640
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               71, 281
               

               Conread position:
               333-640
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               339-639
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               339-639
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               58, 49
               

               Conread position:
               341-639
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 145
               

               Conread position:
               341-639
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 267
               

               Conread position:
               349-638
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               218
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               45, 127
               

               Conread position:
               351-562
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 35
               
Show alignments to all cow chromosomes.