Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-320 |
| Cow position: | chr12:8136847-8136513 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 53, 137 |
| Conread position: | 1-321 |
| Cow position: | chr12:3180558-3180888 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 41 |
| Conread position: | 1-321 |
| Cow position: | chr12:3717130-3716794 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr12:6441698-6441367 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 49, 116 |
| Conread position: | 1-321 |
| Cow position: | chr12:10931228-10931565 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr12:11101391-11101727 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-321 |
| Cow position: | chr12:20459576-20459243 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-321 |
| Cow position: | chr12:22202524-22202202 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 75, 25 |
| Conread position: | 1-321 |
| Cow position: | chr12:25097122-25096788 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr12:41338089-41337753 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-322 |
| Cow position: | chr12:43681148-43681485 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-324 |
| Cow position: | chr12:12755013-12754675 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-325 |
| Cow position: | chr12:30501784-30502116 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 124 |
| Conread position: | 1-329 |
| Cow position: | chr12:36569201-36568858 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 182 |
| Conread position: | 2-321 |
| Cow position: | chr12:18585817-18586152 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 129 |
| Conread position: | 3-321 |
| Cow position: | chr12:25313568-25313234 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 4-341 |
| Cow position: | chr12:10164814-10164466 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 46, 121 |
| Conread position: | 8-322 |
| Cow position: | chr12:17663113-17663429 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 35, 116 |
| Conread position: | 46-329 |
| Cow position: | chr12:31217379-31217667 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 83-639 |
| Cow position: | chr12:37769946-37770514 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 400 |
| Conread position: | 85-329 |
| Cow position: | chr12:8641985-8642239 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 99 |
| Conread position: | 166-320 |
| Cow position: | chr12:5904846-5905010 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 182-326 |
| Cow position: | chr12:40867663-40867817 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 323-638 |
| Cow position: | chr12:31605603-31605281 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 133 |
| Conread position: | 333-525 |
| Cow position: | chr12:26526499-26526693 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 333-572 |
| Cow position: | chr12:31217765-31218010 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 333-639 |
| Cow position: | chr12:9142730-9143035 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 64 |
| Conread position: | 339-559 |
| Cow position: | chr12:6491738-6491527 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 339-591 |
| Cow position: | chr12:3372039-3372301 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 339-620 |
| Cow position: | chr12:15231602-15231892 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 65, 236 |
| Conread position: | 341-639 |
| Cow position: | chr12:18587809-18588110 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 348-639 |
| Cow position: | chr12:44176536-44176237 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 351-639 |
| Cow position: | chr12:3093780-3093495 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 198 |
| Conread position: | 351-639 |
| Cow position: | chr12:32285490-32285792 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 117 |
| Conread position: | 357-639 |
| Cow position: | chr12:28572057-28572346 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 116 |
Show alignments to all cow chromosomes.