Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-321 |
| Cow position: | chr13:9301105-9301428 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 1-321 |
| Cow position: | chr13:15280222-15280557 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr13:20778525-20778200 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 1-321 |
| Cow position: | chr13:22084705-22085040 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 154 |
| Conread position: | 1-322 |
| Cow position: | chr13:13902791-13903127 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-322 |
| Cow position: | chr13:22907334-22906996 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-322 |
| Cow position: | chr13:34345239-34345574 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 1-323 |
| Cow position: | chr13:19843405-19843738 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 272 |
| Conread position: | 1-329 |
| Cow position: | chr13:34905638-34905306 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 49, 131 |
| Conread position: | 1-329 |
| Cow position: | chr13:46104542-46104877 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 3-329 |
| Cow position: | chr13:21764290-21764616 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 48 |
| Conread position: | 5-316 |
| Cow position: | chr13:34928095-34928420 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 50, 211 |
| Conread position: | 20-329 |
| Cow position: | chr13:9537195-9537520 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 120 |
| Conread position: | 59-329 |
| Cow position: | chr13:16345146-16344868 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 204, 25 |
| Conread position: | 76-322 |
| Cow position: | chr13:60392550-60392807 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 137, 18 |
| Conread position: | 113-321 |
| Cow position: | chr13:17456152-17456369 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 7, 137 |
| Conread position: | 137-321 |
| Cow position: | chr13:19016489-19016299 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 99, 138 |
| Conread position: | 152-321 |
| Cow position: | chr13:41807648-41807468 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 178-639 |
| Cow position: | chr13:26080222-26079752 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 325 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 83, 38 |
| Conread position: | 251-640 |
| Cow position: | chr13:35543734-35544120 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 283-563 |
| Cow position: | chr13:7700616-7700909 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 52, 215 |
| Conread position: | 311-639 |
| Cow position: | chr13:60447453-60447789 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 31, 221 |
| Conread position: | 311-639 |
| Cow position: | chr13:60508476-60508819 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 130 |
| Conread position: | 311-639 |
| Cow position: | chr13:61954588-61954926 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 322-639 |
| Cow position: | chr13:58742500-58742830 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 122 |
| Conread position: | 323-488 |
| Cow position: | chr13:46597795-46597622 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 324-639 |
| Cow position: | chr13:30794435-30794124 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 332-636 |
| Cow position: | chr13:19426080-19426391 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 147 |
| Conread position: | 333-563 |
| Cow position: | chr13:4663977-4664218 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 16, 220 |
| Conread position: | 333-593 |
| Cow position: | chr13:54838627-54838374 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 333-635 |
| Cow position: | chr13:32166687-32166994 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 69, 164 |
| Conread position: | 334-635 |
| Cow position: | chr13:6103982-6104272 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 335-639 |
| Cow position: | chr13:21402167-21402491 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 341-639 |
| Cow position: | chr13:12616369-12616059 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 195 |
| Conread position: | 351-556 |
| Cow position: | chr13:34762646-34762431 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.