Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-319 |
| Cow position: | chr14:17757235-17756930 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 129 |
| Conread position: | 1-319 |
| Cow position: | chr14:47645234-47645564 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 1-320 |
| Cow position: | chr14:42259275-42259601 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 49, 112 |
| Conread position: | 1-320 |
| Cow position: | chr14:49995738-49995405 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 1-321 |
| Cow position: | chr14:8517321-8517650 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 121 |
| Conread position: | 1-321 |
| Cow position: | chr14:8885076-8884745 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 119 |
| Conread position: | 1-321 |
| Cow position: | chr14:17689933-17690261 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr14:17771370-17771035 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 1-321 |
| Cow position: | chr14:20786189-20786523 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-322 |
| Cow position: | chr14:34906330-34906667 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-324 |
| Cow position: | chr14:17610619-17610954 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 48, 33 |
| Conread position: | 1-328 |
| Cow position: | chr14:33713807-33714125 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 1-328 |
| Cow position: | chr14:45583119-45583458 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 1-329 |
| Cow position: | chr14:28116866-28117206 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 127 |
| Conread position: | 1-330 |
| Cow position: | chr14:8998420-8998758 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 261 |
| Conread position: | 1-330 |
| Cow position: | chr14:32584220-32583882 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 1-343 |
| Cow position: | chr14:44254009-44253654 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 1-380 |
| Cow position: | chr14:30663235-30662840 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 5-318 |
| Cow position: | chr14:44773020-44772699 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 6-323 |
| Cow position: | chr14:2297905-2298229 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 44, 77 |
| Conread position: | 20-320 |
| Cow position: | chr14:42849777-42849461 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 20-326 |
| Cow position: | chr14:24990456-24990136 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 49-321 |
| Cow position: | chr14:17650814-17651096 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 142 |
| Conread position: | 52-322 |
| Cow position: | chr14:34354411-34354691 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 25, 172 |
| Conread position: | 113-329 |
| Cow position: | chr14:8496000-8495779 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 154, 102 |
| Conread position: | 165-320 |
| Cow position: | chr14:39773932-39774097 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 168-325 |
| Cow position: | chr14:4992181-4992020 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 92, 82 |
| Conread position: | 275-639 |
| Cow position: | chr14:13582032-13582410 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 300 |
| Conread position: | 283-639 |
| Cow position: | chr14:13860352-13859993 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 48 |
| Conread position: | 307-637 |
| Cow position: | chr14:44083553-44083900 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 242 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 33, 135 |
| Conread position: | 311-640 |
| Cow position: | chr14:12834056-12834396 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 311-640 |
| Cow position: | chr14:28350495-28350155 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 243 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 36, 166 |
| Conread position: | 317-636 |
| Cow position: | chr14:38055949-38055619 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 283 |
| Conread position: | 333-638 |
| Cow position: | chr14:19850316-19850630 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 71, 36 |
| Conread position: | 333-639 |
| Cow position: | chr14:403396-403715 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 257 |
| Conread position: | 333-639 |
| Cow position: | chr14:7647355-7647676 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 71, 52 |
| Conread position: | 333-639 |
| Cow position: | chr14:12545912-12546227 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 196 |
| Conread position: | 333-639 |
| Cow position: | chr14:22047338-22047012 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 333-639 |
| Cow position: | chr14:42259696-42259977 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 334-636 |
| Cow position: | chr14:39301697-39302016 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 46, 52 |
| Conread position: | 335-635 |
| Cow position: | chr14:10743201-10742886 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.