Cow genome map


           Conread name:
           rnlu1830b_e5.y1
        

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 74
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 79
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               49, 139
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               48, 120
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 130
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               52, 101
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               48, 120
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               13, 91
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 23
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-639
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 154
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               48, 58
               

               Conread position:
               2-326
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 40
               

               Conread position:
               2-330
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 119
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               48, 118
               

               Conread position:
               3-322
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               3-323
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               3-326
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 102
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               10, 140
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 112
               

               Conread position:
               11-318
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               35, 111
               

               Conread position:
               14-326
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               17-321
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               33, 104
               

               Conread position:
               20-639
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               34-329
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 12
               

               Conread position:
               39-325
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 169
               

               Conread position:
               50-315
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               123-324
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               87, 125
               

               Conread position:
               126-639
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               346
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               146, 214
               

               Conread position:
               127-320
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               134, 12
               

               Conread position:
               134-321
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               138-320
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               143, 149
               

               Conread position:
               151-322
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               95, 105
               

               Conread position:
               307-640
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 226
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               28, 234
               

               Conread position:
               318-636
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               26, 64
               

               Conread position:
               320-640
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               101, 77
               

               Conread position:
               323-574
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               19, 263
               

               Conread position:
               323-638
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               333-561
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               70, 109
               

               Conread position:
               333-630
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 266
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 27
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 60
               

               Conread position:
               339-572
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               339-639
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               65, 90
               

               Conread position:
               341-639
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               345-639
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               58, 46
               

               Conread position:
               351-575
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               354-636
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               
Show alignments to all cow chromosomes.