Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-314 |
| Cow position: | chr16:39615685-39616012 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 120 |
| Conread position: | 1-318 |
| Cow position: | chr16:12160819-12160489 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 1-319 |
| Cow position: | chr16:25955123-25954796 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 165 |
| Conread position: | 1-320 |
| Cow position: | chr16:37671036-37670712 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 49, 124 |
| Conread position: | 1-321 |
| Cow position: | chr16:236957-237274 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 36 |
| Conread position: | 1-321 |
| Cow position: | chr16:1563927-1563591 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 129 |
| Conread position: | 1-321 |
| Cow position: | chr16:2724763-2724427 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr16:3769549-3769211 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 1-321 |
| Cow position: | chr16:25344439-25344776 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr16:26666165-26666501 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 1-321 |
| Cow position: | chr16:48411096-48411432 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-323 |
| Cow position: | chr16:30052410-30052744 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 124 |
| Conread position: | 1-326 |
| Cow position: | chr16:5632548-5632211 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 49, 165 |
| Conread position: | 1-328 |
| Cow position: | chr16:19798224-19797890 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 134 |
| Conread position: | 1-328 |
| Cow position: | chr16:45533923-45534266 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-329 |
| Cow position: | chr16:15570230-15570574 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 121 |
| Conread position: | 1-330 |
| Cow position: | chr16:15187529-15187870 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 1-365 |
| Cow position: | chr16:45608876-45609250 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 136 |
| Conread position: | 2-320 |
| Cow position: | chr16:31425512-31425855 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 98 |
| Conread position: | 2-329 |
| Cow position: | chr16:42733824-42733481 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 172 |
| Conread position: | 3-321 |
| Cow position: | chr16:28468660-28468326 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 128 |
| Conread position: | 3-326 |
| Cow position: | chr16:37058546-37058213 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 86 |
| Conread position: | 3-639 |
| Cow position: | chr16:54179901-54179244 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 128 |
| Conread position: | 4-320 |
| Cow position: | chr16:25263065-25263387 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 17-321 |
| Cow position: | chr16:39033856-39033548 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 103, 33 |
| Conread position: | 20-319 |
| Cow position: | chr16:14029661-14029366 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 46-325 |
| Cow position: | chr16:4367136-4367421 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 217, 37 |
| Conread position: | 119-317 |
| Cow position: | chr16:9417448-9417657 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 140-317 |
| Cow position: | chr16:42079744-42079563 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 123, 49 |
| Conread position: | 140-326 |
| Cow position: | chr16:24876348-24876162 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 124, 19 |
| Conread position: | 159-321 |
| Cow position: | chr16:6380013-6379842 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 106, 70 |
| Conread position: | 182-329 |
| Cow position: | chr16:46223863-46223706 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 288-639 |
| Cow position: | chr16:36247282-36247638 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 43 |
| Conread position: | 310-565 |
| Cow position: | chr16:2202550-2202800 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 310-583 |
| Cow position: | chr16:44139390-44139104 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 31, 126 |
| Conread position: | 311-593 |
| Cow position: | chr16:29538951-29538656 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 311-639 |
| Cow position: | chr16:22798842-22798500 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 311-639 |
| Cow position: | chr16:30311765-30311424 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 151 |
| Conread position: | 333-568 |
| Cow position: | chr16:14100735-14100980 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 333-638 |
| Cow position: | chr16:7136963-7136667 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 68, 185 |
| Conread position: | 333-639 |
| Cow position: | chr16:832225-831897 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 70, 303 |
| Conread position: | 333-639 |
| Cow position: | chr16:49449976-49449665 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 342-639 |
| Cow position: | chr16:9736451-9736149 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 351-639 |
| Cow position: | chr16:44667953-44667639 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 53, 106 |
Show alignments to all cow chromosomes.