Cow genome map


           Conread name:
           rnlu1830b_e5.y1
        

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 120
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 74
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               49, 165
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               252
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               49, 124
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 36
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 129
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 7
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 122
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               40, 124
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               49, 165
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               49, 134
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 121
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 136
               

               Conread position:
               2-320
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 98
               

               Conread position:
               2-329
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 172
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 128
               

               Conread position:
               3-326
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 86
               

               Conread position:
               3-639
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 128
               

               Conread position:
               4-320
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               17-321
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               20-319
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 30
               

               Conread position:
               46-325
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               217, 37
               

               Conread position:
               119-317
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               140-317
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               123, 49
               

               Conread position:
               140-326
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               124, 19
               

               Conread position:
               159-321
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               106, 70
               

               Conread position:
               182-329
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               288-639
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 43
               

               Conread position:
               310-565
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               310-583
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               31, 126
               

               Conread position:
               311-593
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 151
               

               Conread position:
               333-568
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               59, 152
               

               Conread position:
               333-638
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               68, 185
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               70, 303
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               342-639
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               351-639
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               53, 106
               
Show alignments to all cow chromosomes.