Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-321 |
| Cow position: | chr18:16173369-16173033 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr18:28969045-28968709 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr18:51484834-51485167 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 101 |
| Conread position: | 1-322 |
| Cow position: | chr18:14419221-14419557 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 320 |
| Conread position: | 1-322 |
| Cow position: | chr18:36913127-36912825 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 1-327 |
| Cow position: | chr18:28930169-28929852 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 36 |
| Conread position: | 1-328 |
| Cow position: | chr18:26335904-26335577 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 75, 29 |
| Conread position: | 1-330 |
| Cow position: | chr18:28084291-28084636 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-330 |
| Cow position: | chr18:29863360-29863015 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-330 |
| Cow position: | chr18:36908598-36908288 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 2-317 |
| Cow position: | chr18:26844836-26844522 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 2-329 |
| Cow position: | chr18:13508816-13508480 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 3-321 |
| Cow position: | chr18:5536218-5536553 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 118 |
| Conread position: | 3-325 |
| Cow position: | chr18:12269401-12269736 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 4-321 |
| Cow position: | chr18:44261314-44261645 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 186 |
| Conread position: | 5-313 |
| Cow position: | chr18:12241098-12241389 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 6-330 |
| Cow position: | chr18:32280222-32280556 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 44, 128 |
| Conread position: | 38-323 |
| Cow position: | chr18:16025373-16025075 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 39-368 |
| Cow position: | chr18:30035442-30035103 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 323 |
| Conread position: | 95-329 |
| Cow position: | chr18:29059476-29059242 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 42 |
| Conread position: | 102-327 |
| Cow position: | chr18:45905522-45905288 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 136, 71 |
| Conread position: | 135-317 |
| Cow position: | chr18:7649037-7649227 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 139-313 |
| Cow position: | chr18:7953032-7953216 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 185-329 |
| Cow position: | chr18:9364984-9365136 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 311-629 |
| Cow position: | chr18:35057656-35057988 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 25, 300 |
| Conread position: | 323-537 |
| Cow position: | chr18:56472931-56473156 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 49 |
| Conread position: | 323-639 |
| Cow position: | chr18:1144893-1144564 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 323-639 |
| Cow position: | chr18:9975000-9974675 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 191 |
| Conread position: | 323-639 |
| Cow position: | chr18:51679556-51679224 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 323-640 |
| Cow position: | chr18:24685769-24686088 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 56, 162 |
| Conread position: | 326-493 |
| Cow position: | chr18:43780840-43780665 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 152 |
| Conread position: | 333-516 |
| Cow position: | chr18:24219381-24219572 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 334-609 |
| Cow position: | chr18:29059146-29058864 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 60, 115 |
| Conread position: | 334-614 |
| Cow position: | chr18:32245384-32245101 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 334-639 |
| Cow position: | chr18:23659220-23658910 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 39 |
| Conread position: | 339-638 |
| Cow position: | chr18:9089052-9089354 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 175 |
| Conread position: | 339-639 |
| Cow position: | chr18:24293195-24293509 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.