Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-321 |
| Cow position: | chr19:3176711-3177048 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-321 |
| Cow position: | chr19:4599267-4599596 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 1-321 |
| Cow position: | chr19:33944817-33945152 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 1-321 |
| Cow position: | chr19:40791106-40790772 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr19:42581059-42580739 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 1-327 |
| Cow position: | chr19:39182290-39181948 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-327 |
| Cow position: | chr19:46821106-46821443 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 86 |
| Conread position: | 1-328 |
| Cow position: | chr19:37653425-37653755 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 93 |
| Conread position: | 1-328 |
| Cow position: | chr19:38893969-38894311 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-329 |
| Cow position: | chr19:20403534-20403877 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 118 |
| Conread position: | 1-329 |
| Cow position: | chr19:35843104-35843447 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 3-321 |
| Cow position: | chr19:175720-176063 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 47, 118 |
| Conread position: | 4-321 |
| Cow position: | chr19:30473896-30473559 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 172 |
| Conread position: | 6-329 |
| Cow position: | chr19:38397348-38397019 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 55-341 |
| Cow position: | chr19:14528143-14528428 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 177, 20 |
| Conread position: | 124-321 |
| Cow position: | chr19:14180621-14180415 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 124-330 |
| Cow position: | chr19:15796803-15797019 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 129-322 |
| Cow position: | chr19:39076830-39077025 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 134, 47 |
| Conread position: | 133-328 |
| Cow position: | chr19:44216461-44216258 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 134, 33 |
| Conread position: | 133-330 |
| Cow position: | chr19:50833514-50833308 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 134-322 |
| Cow position: | chr19:39750564-39750746 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 101, 39 |
| Conread position: | 138-320 |
| Cow position: | chr19:42274828-42274638 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 123, 48 |
| Conread position: | 142-323 |
| Cow position: | chr19:14580676-14580868 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 175-342 |
| Cow position: | chr19:53737432-53737600 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 63, 86 |
| Conread position: | 182-324 |
| Cow position: | chr19:42725454-42725600 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 85, 9 |
| Conread position: | 280-639 |
| Cow position: | chr19:18016584-18016214 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 311-563 |
| Cow position: | chr19:3488544-3488805 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 333-535 |
| Cow position: | chr19:15797096-15797298 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 109 |
| Conread position: | 333-573 |
| Cow position: | chr19:33925905-33926152 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 47, 149 |
| Conread position: | 333-639 |
| Cow position: | chr19:26976650-26976336 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 56, 66 |
| Conread position: | 333-639 |
| Cow position: | chr19:36124954-36125258 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 70, 46 |
Show alignments to all cow chromosomes.