Cow genome map


           Conread name:
           rnlu1830b_e5.y1
        

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 178
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               49, 122
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               84, 49
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               236
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 113
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               48, 66
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 74
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 13
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               49, 121
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               49, 25
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 92
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 80
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               49, 22
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               49, 140
               

               Conread position:
               1-341
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               49, 214
               

               Conread position:
               1-388
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 155
               

               Conread position:
               1-567
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 25
               

               Conread position:
               2-317
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               48, 93
               

               Conread position:
               2-321
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 129
               

               Conread position:
               2-327
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               234
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               48, 5
               

               Conread position:
               2-328
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 94
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 134
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               46, 133
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               29, 96
               

               Conread position:
               5-353
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               81, 45
               

               Conread position:
               9-321
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               41, 122
               

               Conread position:
               29-321
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               39-321
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 171
               

               Conread position:
               45-327
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 193
               

               Conread position:
               52-320
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 130
               

               Conread position:
               65-328
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               11, 180
               

               Conread position:
               124-321
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               126-316
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               131-324
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               133-321
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               134-327
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               103, 131
               

               Conread position:
               138-318
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               145-320
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               122, 105
               

               Conread position:
               150-320
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               164-330
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               75, 53
               

               Conread position:
               192-341
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 26
               

               Conread position:
               305-572
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               29, 82
               

               Conread position:
               307-636
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               138, 97
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               92, 207
               

               Conread position:
               321-597
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               11, 209
               

               Conread position:
               323-566
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 128
               

               Conread position:
               323-575
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               17, 199
               

               Conread position:
               323-639
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 179
               

               Conread position:
               333-543
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               333-549
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               71, 197
               

               Conread position:
               333-617
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 241
               

               Conread position:
               333-629
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               70, 18
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               70, 113
               

               Conread position:
               334-639
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               69, 128
               

               Conread position:
               339-572
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               65, 111
               

               Conread position:
               339-639
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               63, 9
               
Show alignments to all cow chromosomes.