Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-315 |
| Cow position: | chr2:6698518-6698213 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 74, 23 |
| Conread position: | 1-317 |
| Cow position: | chr2:78301701-78301377 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-320 |
| Cow position: | chr2:20856900-20856567 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 178 |
| Conread position: | 1-321 |
| Cow position: | chr2:279550-279219 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 1-321 |
| Cow position: | chr2:12221598-12221265 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-321 |
| Cow position: | chr2:25885855-25885520 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr2:32063034-32062707 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 84, 49 |
| Conread position: | 1-321 |
| Cow position: | chr2:50980461-50980139 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr2:51921871-51921534 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr2:56307136-56306801 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 236 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-322 |
| Cow position: | chr2:2603360-2603692 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 1-322 |
| Cow position: | chr2:73992419-73992756 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-324 |
| Cow position: | chr2:13726905-13726590 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 1-326 |
| Cow position: | chr2:12285897-12286231 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 1-326 |
| Cow position: | chr2:36867856-36867524 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 1-326 |
| Cow position: | chr2:53556859-53557199 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 49, 121 |
| Conread position: | 1-329 |
| Cow position: | chr2:30924160-30924502 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 49, 25 |
| Conread position: | 1-329 |
| Cow position: | chr2:33090967-33091310 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 92 |
| Conread position: | 1-330 |
| Cow position: | chr2:2018259-2018598 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 80 |
| Conread position: | 1-330 |
| Cow position: | chr2:53003510-53003167 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-330 |
| Cow position: | chr2:70498935-70498597 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 242 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 1-330 |
| Cow position: | chr2:79978387-79978052 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 49, 140 |
| Conread position: | 1-341 |
| Cow position: | chr2:72757241-72757584 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 49, 214 |
| Conread position: | 1-388 |
| Cow position: | chr2:41009732-41009330 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 155 |
| Conread position: | 1-567 |
| Cow position: | chr2:32432668-32432106 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 25 |
| Conread position: | 2-317 |
| Cow position: | chr2:46272526-46272197 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 2-321 |
| Cow position: | chr2:10262713-10262380 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 129 |
| Conread position: | 2-327 |
| Cow position: | chr2:817152-817472 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 2-328 |
| Cow position: | chr2:58977786-58978128 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 48, 94 |
| Conread position: | 3-321 |
| Cow position: | chr2:27075313-27075635 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 134 |
| Conread position: | 5-322 |
| Cow position: | chr2:11501637-11501969 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 133 |
| Conread position: | 5-323 |
| Cow position: | chr2:11735434-11735768 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 96 |
| Conread position: | 5-353 |
| Cow position: | chr2:9407260-9407607 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 81, 45 |
| Conread position: | 9-321 |
| Cow position: | chr2:21169050-21169371 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 41, 122 |
| Conread position: | 29-321 |
| Cow position: | chr2:38207294-38206993 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 39-321 |
| Cow position: | chr2:38659789-38659508 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 171 |
| Conread position: | 45-327 |
| Cow position: | chr2:21407216-21407508 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 193 |
| Conread position: | 52-320 |
| Cow position: | chr2:1657050-1657323 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 130 |
| Conread position: | 65-328 |
| Cow position: | chr2:56076096-56076369 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 11, 180 |
| Conread position: | 124-321 |
| Cow position: | chr2:15963725-15963518 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 126-316 |
| Cow position: | chr2:45913563-45913363 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 131-324 |
| Cow position: | chr2:22133888-22133687 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 133-321 |
| Cow position: | chr2:56366113-56365916 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 134-327 |
| Cow position: | chr2:63274845-63274645 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 103, 131 |
| Conread position: | 138-318 |
| Cow position: | chr2:65935372-65935182 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 145-320 |
| Cow position: | chr2:41162085-41162269 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 122, 105 |
| Conread position: | 150-320 |
| Cow position: | chr2:74210847-74210667 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 164-330 |
| Cow position: | chr2:4255427-4255245 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 75, 53 |
| Conread position: | 192-341 |
| Cow position: | chr2:14348890-14349046 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 26 |
| Conread position: | 305-572 |
| Cow position: | chr2:72789920-72789640 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 307-636 |
| Cow position: | chr2:5797710-5797387 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 138, 97 |
| Conread position: | 311-639 |
| Cow position: | chr2:5606497-5606836 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 311-639 |
| Cow position: | chr2:15812027-15812366 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 92, 207 |
| Conread position: | 321-597 |
| Cow position: | chr2:30922148-30922427 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 11, 209 |
| Conread position: | 323-566 |
| Cow position: | chr2:287815-287560 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 128 |
| Conread position: | 323-575 |
| Cow position: | chr2:29733634-29733897 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 17, 199 |
| Conread position: | 323-639 |
| Cow position: | chr2:21210874-21211212 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 179 |
| Conread position: | 333-543 |
| Cow position: | chr2:20807438-20807644 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 333-549 |
| Cow position: | chr2:23701319-23701094 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 197 |
| Conread position: | 333-617 |
| Cow position: | chr2:9688185-9687901 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 241 |
| Conread position: | 333-629 |
| Cow position: | chr2:10729813-10729504 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 333-639 |
| Cow position: | chr2:276073-276381 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 70, 18 |
| Conread position: | 333-639 |
| Cow position: | chr2:58024680-58024995 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 70, 113 |
| Conread position: | 334-639 |
| Cow position: | chr2:11805703-11806001 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 69, 128 |
| Conread position: | 339-572 |
| Cow position: | chr2:36018048-36017805 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 65, 111 |
| Conread position: | 339-639 |
| Cow position: | chr2:6282622-6282307 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 63, 9 |
Show alignments to all cow chromosomes.