Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-316 |
| Cow position: | chr20:15240821-15240496 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 16 |
| Conread position: | 1-318 |
| Cow position: | chr20:22222392-22222060 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-319 |
| Cow position: | chr20:28113203-28113529 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 33 |
| Conread position: | 1-321 |
| Cow position: | chr20:6550785-6550449 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-321 |
| Cow position: | chr20:7597644-7597313 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr20:10921710-10921377 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 125 |
| Conread position: | 1-321 |
| Cow position: | chr20:15295233-15295566 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 90 |
| Conread position: | 1-321 |
| Cow position: | chr20:23466437-23466101 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-321 |
| Cow position: | chr20:27876694-27877032 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 35, 135 |
| Conread position: | 1-325 |
| Cow position: | chr20:24904331-24903993 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-327 |
| Cow position: | chr20:6259079-6258745 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 100 |
| Conread position: | 1-327 |
| Cow position: | chr20:25658810-25658469 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 1-327 |
| Cow position: | chr20:27994312-27993970 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 122 |
| Conread position: | 1-329 |
| Cow position: | chr20:9707917-9707582 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 1-330 |
| Cow position: | chr20:13661132-13660787 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-342 |
| Cow position: | chr20:28140954-28141311 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 101 |
| Conread position: | 1-388 |
| Cow position: | chr20:19352857-19352463 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 39, 140 |
| Conread position: | 2-321 |
| Cow position: | chr20:17658017-17657683 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 2-321 |
| Cow position: | chr20:26999710-27000044 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 2-365 |
| Cow position: | chr20:7568751-7568384 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 263 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 23, 111 |
| Conread position: | 2-365 |
| Cow position: | chr20:7593238-7592870 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 23, 111 |
| Conread position: | 4-323 |
| Cow position: | chr20:3782488-3782152 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 5-320 |
| Cow position: | chr20:36374980-36374651 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 38, 91 |
| Conread position: | 34-327 |
| Cow position: | chr20:18322305-18322009 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 64-323 |
| Cow position: | chr20:12489864-12489598 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 106 |
| Conread position: | 105-322 |
| Cow position: | chr20:21768289-21768064 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 162, 33 |
| Conread position: | 111-327 |
| Cow position: | chr20:29843637-29843856 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 152, 84 |
| Conread position: | 124-321 |
| Cow position: | chr20:35037038-35036831 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 128-318 |
| Cow position: | chr20:31000546-31000742 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 135, 6 |
| Conread position: | 137-323 |
| Cow position: | chr20:40781093-40781288 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 129, 180 |
| Conread position: | 139-319 |
| Cow position: | chr20:7225526-7225713 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 146-323 |
| Cow position: | chr20:5077314-5077504 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 150-321 |
| Cow position: | chr20:33563785-33563966 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 171-321 |
| Cow position: | chr20:13789453-13789611 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 191-328 |
| Cow position: | chr20:13055923-13055779 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 307-639 |
| Cow position: | chr20:28440663-28440995 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 99 |
| Conread position: | 310-619 |
| Cow position: | chr20:16107114-16107434 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 314-639 |
| Cow position: | chr20:14210760-14210437 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 22, 170 |
| Conread position: | 332-530 |
| Cow position: | chr20:15527383-15527594 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 332-640 |
| Cow position: | chr20:23847553-23847244 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 165 |
| Conread position: | 339-639 |
| Cow position: | chr20:2486665-2486967 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 126 |
| Conread position: | 341-499 |
| Cow position: | chr20:35064380-35064539 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 342-638 |
| Cow position: | chr20:4911506-4911812 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 238 |
Show alignments to all cow chromosomes.