Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-317 |
| Cow position: | chr21:21001058-21000726 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 1-318 |
| Cow position: | chr21:9863606-9863292 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 77, 18 |
| Conread position: | 1-319 |
| Cow position: | chr21:45782402-45782075 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 49, 125 |
| Conread position: | 1-320 |
| Cow position: | chr21:21966505-21966828 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 1-320 |
| Cow position: | chr21:33983952-33983617 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-321 |
| Cow position: | chr21:3252948-3253292 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 1-321 |
| Cow position: | chr21:13749484-13749818 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 1-321 |
| Cow position: | chr21:17144011-17144347 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 1-321 |
| Cow position: | chr21:17720907-17721237 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 1-321 |
| Cow position: | chr21:27608377-27608043 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 1-321 |
| Cow position: | chr21:30595767-30595431 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr21:31275667-31276001 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 71 |
| Conread position: | 1-330 |
| Cow position: | chr21:5020469-5020810 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 130 |
| Conread position: | 1-330 |
| Cow position: | chr21:36534885-36534540 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 2-319 |
| Cow position: | chr21:36977607-36977283 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 140 |
| Conread position: | 2-321 |
| Cow position: | chr21:34684373-34684689 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 48, 112 |
| Conread position: | 2-324 |
| Cow position: | chr21:3766445-3766108 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 3-320 |
| Cow position: | chr21:22855238-22855556 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 109 |
| Conread position: | 3-321 |
| Cow position: | chr21:27066274-27065940 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 47, 128 |
| Conread position: | 4-329 |
| Cow position: | chr21:2419525-2419861 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 46, 76 |
| Conread position: | 5-328 |
| Cow position: | chr21:4738966-4739299 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 34, 75 |
| Conread position: | 6-321 |
| Cow position: | chr21:5596130-5596449 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 261, 44 |
| Conread position: | 7-320 |
| Cow position: | chr21:37323469-37323145 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 10-325 |
| Cow position: | chr21:649347-649017 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 40, 119 |
| Conread position: | 20-321 |
| Cow position: | chr21:37298486-37298799 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 45-321 |
| Cow position: | chr21:23784030-23783745 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 83-342 |
| Cow position: | chr21:28811172-28810908 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 76 |
| Conread position: | 131-321 |
| Cow position: | chr21:38899913-38900103 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 133, 29 |
| Conread position: | 164-321 |
| Cow position: | chr21:744202-744045 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 117, 13 |
| Conread position: | 172-341 |
| Cow position: | chr21:28441943-28442121 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 95, 51 |
| Conread position: | 311-572 |
| Cow position: | chr21:24606804-24607074 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 314-630 |
| Cow position: | chr21:9511753-9511418 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 318-638 |
| Cow position: | chr21:29015739-29015415 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 102 |
| Conread position: | 323-537 |
| Cow position: | chr21:42542976-42542762 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 93 |
| Conread position: | 325-639 |
| Cow position: | chr21:27743172-27743486 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 333-565 |
| Cow position: | chr21:9011746-9011501 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 333-597 |
| Cow position: | chr21:33620197-33620468 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 333-636 |
| Cow position: | chr21:2293435-2293120 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 279 |
| Conread position: | 333-638 |
| Cow position: | chr21:1463661-1463977 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 333-639 |
| Cow position: | chr21:18818899-18818584 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 57, 126 |
| Conread position: | 336-639 |
| Cow position: | chr21:31276157-31276466 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 65, 111 |
| Conread position: | 339-638 |
| Cow position: | chr21:6765264-6764958 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 63, 109 |
| Conread position: | 339-639 |
| Cow position: | chr21:20926061-20925760 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 342-639 |
| Cow position: | chr21:14727501-14727793 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 254 |
Show alignments to all cow chromosomes.