Cow genome map


           Conread name:
           rnlu1830b_e5.y1
        

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 263
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 148
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 118
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               49, 27
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 127
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 131
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 94
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 122
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 185
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               49, 88
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 16
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 129
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 16
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               36, 94
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               49, 16
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 160
               

               Conread position:
               2-321
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               2-337
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 139
               

               Conread position:
               3-320
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 122
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 80
               

               Conread position:
               4-321
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               46, 127
               

               Conread position:
               5-329
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               6-335
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 27
               

               Conread position:
               8-328
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               33, 101
               

               Conread position:
               38-317
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               39-326
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 58
               

               Conread position:
               49-321
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 67
               

               Conread position:
               57-321
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 69
               

               Conread position:
               62-321
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               65-321
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 10
               

               Conread position:
               124-321
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               138-317
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               157-321
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 271
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               311-640
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               23, 150
               

               Conread position:
               312-639
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 259
               

               Conread position:
               333-546
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               55, 118
               

               Conread position:
               333-571
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               52, 154
               

               Conread position:
               333-636
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 62
               

               Conread position:
               333-636
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               336-637
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 37
               

               Conread position:
               339-640
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               343-639
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 104
               
Show alignments to all cow chromosomes.