Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-317 |
| Cow position: | chr23:26828396-26828724 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 1-319 |
| Cow position: | chr23:14840026-14839711 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 66, 53 |
| Conread position: | 1-321 |
| Cow position: | chr23:1959271-1959606 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 1-321 |
| Cow position: | chr23:5624429-5624100 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-321 |
| Cow position: | chr23:11781928-11782265 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 131 |
| Conread position: | 1-321 |
| Cow position: | chr23:15180102-15180437 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr23:20153078-20152741 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 121 |
| Conread position: | 1-321 |
| Cow position: | chr23:22144166-22143831 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 1-321 |
| Cow position: | chr23:22170051-22170386 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 49, 155 |
| Conread position: | 1-322 |
| Cow position: | chr23:345312-344989 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 51, 126 |
| Conread position: | 1-329 |
| Cow position: | chr23:2023941-2023597 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-329 |
| Cow position: | chr23:19492992-19493336 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 1-329 |
| Cow position: | chr23:30634451-30634107 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 130 |
| Conread position: | 2-321 |
| Cow position: | chr23:2791618-2791294 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 48, 119 |
| Conread position: | 2-639 |
| Cow position: | chr23:20171058-20170371 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 79 |
| Conread position: | 3-321 |
| Cow position: | chr23:15528732-15529066 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 118 |
| Conread position: | 3-321 |
| Cow position: | chr23:28305987-28306324 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 38, 102 |
| Conread position: | 3-326 |
| Cow position: | chr23:10417445-10417104 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 7-321 |
| Cow position: | chr23:14959802-14959478 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 119 |
| Conread position: | 7-329 |
| Cow position: | chr23:6173869-6173533 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 94 |
| Conread position: | 9-326 |
| Cow position: | chr23:40539526-40539216 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 10-341 |
| Cow position: | chr23:3167194-3167531 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 11-326 |
| Cow position: | chr23:1399060-1398748 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 36, 141 |
| Conread position: | 14-321 |
| Cow position: | chr23:35325072-35324753 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 27, 81 |
| Conread position: | 18-322 |
| Cow position: | chr23:36308373-36308684 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 32, 117 |
| Conread position: | 37-321 |
| Cow position: | chr23:40553936-40553643 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 39-321 |
| Cow position: | chr23:23193241-23192957 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 100 |
| Conread position: | 45-321 |
| Cow position: | chr23:24098320-24098607 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 31, 81 |
| Conread position: | 124-321 |
| Cow position: | chr23:39389341-39389548 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 181-322 |
| Cow position: | chr23:14738228-14738379 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 311-639 |
| Cow position: | chr23:7494170-7494509 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 312-630 |
| Cow position: | chr23:33233780-33233445 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 24, 281 |
| Conread position: | 322-639 |
| Cow position: | chr23:17404165-17404494 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 333-462 |
| Cow position: | chr23:25580767-25580630 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 333-546 |
| Cow position: | chr23:20216522-20216741 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 184 |
| Conread position: | 333-573 |
| Cow position: | chr23:7265847-7265597 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 70, 169 |
| Conread position: | 333-616 |
| Cow position: | chr23:1337921-1337639 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 70, 126 |
| Conread position: | 333-633 |
| Cow position: | chr23:26230694-26231003 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 333-639 |
| Cow position: | chr23:15038765-15038453 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 90 |
| Conread position: | 334-496 |
| Cow position: | chr23:25357913-25358085 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 341-626 |
| Cow position: | chr23:4809615-4809903 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 63, 118 |
Show alignments to all cow chromosomes.