Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-313 |
| Cow position: | chr24:28497897-28497571 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 1-319 |
| Cow position: | chr24:29179602-29179930 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 194 |
| Conread position: | 1-320 |
| Cow position: | chr24:12090216-12090551 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 48, 118 |
| Conread position: | 1-321 |
| Cow position: | chr24:6035945-6035609 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 1-321 |
| Cow position: | chr24:13374278-13373942 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 50, 143 |
| Conread position: | 1-321 |
| Cow position: | chr24:17105641-17105304 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 165 |
| Conread position: | 1-321 |
| Cow position: | chr24:18223244-18222907 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 129 |
| Conread position: | 1-321 |
| Cow position: | chr24:23052652-23052312 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-321 |
| Cow position: | chr24:36036590-36036259 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 124 |
| Conread position: | 1-322 |
| Cow position: | chr24:29190524-29190855 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 104 |
| Conread position: | 1-323 |
| Cow position: | chr24:14760128-14760467 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 131 |
| Conread position: | 1-341 |
| Cow position: | chr24:16908540-16908890 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 127 |
| Conread position: | 2-322 |
| Cow position: | chr24:22975045-22975380 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 164 |
| Conread position: | 3-365 |
| Cow position: | chr24:9380211-9380582 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 135 |
| Conread position: | 4-329 |
| Cow position: | chr24:31356840-31357170 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 6-321 |
| Cow position: | chr24:32853453-32853784 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 125 |
| Conread position: | 6-326 |
| Cow position: | chr24:28688671-28688988 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 49 |
| Conread position: | 7-326 |
| Cow position: | chr24:38641617-38641947 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 43, 118 |
| Conread position: | 86-320 |
| Cow position: | chr24:30765649-30765894 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 34, 6 |
| Conread position: | 86-322 |
| Cow position: | chr24:39258176-39258415 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 167, 29 |
| Conread position: | 89-328 |
| Cow position: | chr24:27761396-27761644 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 119-319 |
| Cow position: | chr24:10852903-10852699 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 143, 54 |
| Conread position: | 119-319 |
| Cow position: | chr24:27762603-27762816 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 101, 75 |
| Conread position: | 122-329 |
| Cow position: | chr24:25677074-25677290 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 162-325 |
| Cow position: | chr24:36131805-36131632 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 106, 82 |
| Conread position: | 311-619 |
| Cow position: | chr24:19706871-19707187 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 311-639 |
| Cow position: | chr24:7782487-7782143 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 325-639 |
| Cow position: | chr24:35872588-35872268 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 333-564 |
| Cow position: | chr24:29180023-29180259 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 333-574 |
| Cow position: | chr24:19040495-19040256 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 58 |
| Conread position: | 333-637 |
| Cow position: | chr24:23052225-23051917 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 70, 181 |
| Conread position: | 333-638 |
| Cow position: | chr24:41200362-41200674 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 77, 179 |
| Conread position: | 333-638 |
| Cow position: | chr24:44877183-44877486 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 334-629 |
| Cow position: | chr24:16908977-16909283 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 336-640 |
| Cow position: | chr24:18732763-18732457 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 353-572 |
| Cow position: | chr24:7138366-7138589 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 123 |
Show alignments to all cow chromosomes.