Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-317 |
| Cow position: | chr27:9332822-9333143 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 49, 119 |
| Conread position: | 1-320 |
| Cow position: | chr27:11489786-11490101 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 165, 48 |
| Conread position: | 1-321 |
| Cow position: | chr27:8201082-8201415 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 49, 90 |
| Conread position: | 1-321 |
| Cow position: | chr27:9263133-9262797 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 1-321 |
| Cow position: | chr27:24296125-24295780 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-321 |
| Cow position: | chr27:27291533-27291873 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-322 |
| Cow position: | chr27:1536314-1536650 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 90 |
| Conread position: | 1-322 |
| Cow position: | chr27:21392156-21392492 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 190 |
| Conread position: | 1-324 |
| Cow position: | chr27:4982516-4982855 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 1-324 |
| Cow position: | chr27:16427807-16428135 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 49, 114 |
| Conread position: | 1-326 |
| Cow position: | chr27:13901268-13901609 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 1-338 |
| Cow position: | chr27:5914077-5914425 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 4-321 |
| Cow position: | chr27:11481078-11481411 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 46, 127 |
| Conread position: | 8-309 |
| Cow position: | chr27:3643308-3642999 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 46, 241 |
| Conread position: | 83-360 |
| Cow position: | chr27:19388960-19388679 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 130, 31 |
| Conread position: | 84-320 |
| Cow position: | chr27:9089878-9090117 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 183, 70 |
| Conread position: | 115-321 |
| Cow position: | chr27:28984034-28984245 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 144-325 |
| Cow position: | chr27:16934990-16934795 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 155-322 |
| Cow position: | chr27:2936130-2936302 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 170-323 |
| Cow position: | chr27:6018878-6019034 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 311-639 |
| Cow position: | chr27:8187377-8187718 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 237 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 313-639 |
| Cow position: | chr27:14297752-14298085 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 23, 142 |
| Conread position: | 323-499 |
| Cow position: | chr27:28145860-28146046 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 324-638 |
| Cow position: | chr27:4719288-4719619 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 294 |
| Conread position: | 325-637 |
| Cow position: | chr27:16260368-16260688 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 79, 140 |
| Conread position: | 334-639 |
| Cow position: | chr27:27063857-27064169 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 351-638 |
| Cow position: | chr27:26653883-26653581 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 77 |
Show alignments to all cow chromosomes.