Cow genome map


           Conread name:
           rnlu1830b_e5.y1
        

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 122
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               54, 120
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 32
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               49, 180
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               48, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 140
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 139
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 138
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               49, 90
               

               Conread position:
               1-341
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               5-329
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               44, 89
               

               Conread position:
               6-321
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 125
               

               Conread position:
               8-328
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 127
               

               Conread position:
               10-317
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               37, 14
               

               Conread position:
               29-320
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               21, 102
               

               Conread position:
               45-321
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               31, 71
               

               Conread position:
               50-323
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               26, 41
               

               Conread position:
               84-319
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               178, 39
               

               Conread position:
               128-327
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               134, 62
               

               Conread position:
               129-320
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               133-321
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               145-321
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               154-323
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               301-496
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               89, 73
               

               Conread position:
               308-639
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               44, 39
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 265
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 265
               

               Conread position:
               322-639
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               246
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               14, 303
               

               Conread position:
               333-636
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               69, 139
               

               Conread position:
               333-638
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               88, 187
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               70, 175
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               63, 110
               

               Conread position:
               333-640
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 254
               

               Conread position:
               339-639
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               64, 304
               

               Conread position:
               351-639
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               53, 134
               
Show alignments to all cow chromosomes.