Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-316 |
| Cow position: | chr28:3001666-3001338 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 122 |
| Conread position: | 1-316 |
| Cow position: | chr28:4376223-4375901 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 54, 120 |
| Conread position: | 1-318 |
| Cow position: | chr28:958064-958381 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 1-321 |
| Cow position: | chr28:785857-786187 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 49, 180 |
| Conread position: | 1-321 |
| Cow position: | chr28:5748516-5748180 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-321 |
| Cow position: | chr28:6959419-6959755 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 130 |
| Conread position: | 1-321 |
| Cow position: | chr28:7005217-7005554 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-321 |
| Cow position: | chr28:17663759-17663423 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-321 |
| Cow position: | chr28:26419811-26419475 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 140 |
| Conread position: | 1-321 |
| Cow position: | chr28:29036462-29036126 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-321 |
| Cow position: | chr28:34597434-34597771 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 1-322 |
| Cow position: | chr28:1025143-1024806 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-324 |
| Cow position: | chr28:29473189-29473520 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 238 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 85, 26 |
| Conread position: | 1-328 |
| Cow position: | chr28:23675004-23675346 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 138 |
| Conread position: | 1-330 |
| Cow position: | chr28:10473157-10473493 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 49, 90 |
| Conread position: | 1-341 |
| Cow position: | chr28:17602853-17602493 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 5-329 |
| Cow position: | chr28:22201149-22201482 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 6-321 |
| Cow position: | chr28:6046991-6047317 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 125 |
| Conread position: | 8-328 |
| Cow position: | chr28:12429405-12429737 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 127 |
| Conread position: | 10-317 |
| Cow position: | chr28:4457529-4457852 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 29-320 |
| Cow position: | chr28:10578880-10578571 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 21, 102 |
| Conread position: | 45-321 |
| Cow position: | chr28:3188777-3188491 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 31, 71 |
| Conread position: | 50-323 |
| Cow position: | chr28:20310180-20310463 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 84-319 |
| Cow position: | chr28:12081641-12081406 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 178, 39 |
| Conread position: | 128-327 |
| Cow position: | chr28:20964552-20964344 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 134, 62 |
| Conread position: | 129-320 |
| Cow position: | chr28:10589920-10589729 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 133-321 |
| Cow position: | chr28:12156007-12156205 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 145-321 |
| Cow position: | chr28:11787615-11787433 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 154-323 |
| Cow position: | chr28:29198826-29199005 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 301-496 |
| Cow position: | chr28:31609654-31609850 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 89, 73 |
| Conread position: | 308-639 |
| Cow position: | chr28:25847589-25847935 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 311-639 |
| Cow position: | chr28:19194109-19194448 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 265 |
| Conread position: | 311-639 |
| Cow position: | chr28:21767548-21767209 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 265 |
| Conread position: | 322-639 |
| Cow position: | chr28:34200100-34199759 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 14, 303 |
| Conread position: | 333-636 |
| Cow position: | chr28:16215522-16215207 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 69, 139 |
| Conread position: | 333-638 |
| Cow position: | chr28:7814481-7814775 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 88, 187 |
| Conread position: | 333-639 |
| Cow position: | chr28:615597-615910 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 70, 175 |
| Conread position: | 333-639 |
| Cow position: | chr28:32717622-32717314 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 63, 110 |
| Conread position: | 333-640 |
| Cow position: | chr28:21363132-21363446 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 254 |
| Conread position: | 339-639 |
| Cow position: | chr28:17602414-17602097 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 64, 304 |
| Conread position: | 351-639 |
| Cow position: | chr28:10642632-10642329 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 53, 134 |
Show alignments to all cow chromosomes.