Cow genome map


           Conread name:
           rnlu1830b_e5.y1
        

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 120
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 122
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 79
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 139
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               75, 34
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 124
               

               Conread position:
               1-332
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               75, 50
               

               Conread position:
               2-324
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               45, 82
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 118
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               3-323
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               3-326
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               6-325
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               7-321
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               43, 114
               

               Conread position:
               55-321
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               59-322
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 111
               

               Conread position:
               79-320
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 143
               

               Conread position:
               123-316
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               134-329
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               142-329
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               22, 99
               

               Conread position:
               149-314
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               306-636
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               49, 202
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               23, 65
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               92, 28
               

               Conread position:
               322-639
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               34, 22
               

               Conread position:
               333-572
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               333-572
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               333-609
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               69, 163
               

               Conread position:
               333-620
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 247
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               70, 96
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               55, 141
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 51
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               335-612
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               72, 56
               

               Conread position:
               336-638
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 9
               
Show alignments to all cow chromosomes.