Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-318 |
| Cow position: | chr29:45462394-45462725 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 120 |
| Conread position: | 1-320 |
| Cow position: | chr29:12797743-12798079 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-321 |
| Cow position: | chr29:5240555-5240892 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 1-321 |
| Cow position: | chr29:5961166-5961500 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 1-321 |
| Cow position: | chr29:34794702-34794362 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 1-322 |
| Cow position: | chr29:1576816-1576511 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 75, 34 |
| Conread position: | 1-322 |
| Cow position: | chr29:43326675-43327012 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-324 |
| Cow position: | chr29:11786164-11786503 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 124 |
| Conread position: | 1-332 |
| Cow position: | chr29:8624035-8623700 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 240 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 75, 50 |
| Conread position: | 2-324 |
| Cow position: | chr29:32289553-32289884 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 3-321 |
| Cow position: | chr29:2838173-2837839 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 118 |
| Conread position: | 3-321 |
| Cow position: | chr29:7427979-7427645 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 3-323 |
| Cow position: | chr29:36208860-36209193 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 3-326 |
| Cow position: | chr29:137522-137862 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 32 |
| Conread position: | 6-325 |
| Cow position: | chr29:9939635-9939293 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 7-321 |
| Cow position: | chr29:14208400-14208071 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 43, 114 |
| Conread position: | 55-321 |
| Cow position: | chr29:35076344-35076621 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 59-322 |
| Cow position: | chr29:4875907-4875641 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 111 |
| Conread position: | 79-320 |
| Cow position: | chr29:10297617-10297368 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 143 |
| Conread position: | 123-316 |
| Cow position: | chr29:2693990-2694193 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 134-329 |
| Cow position: | chr29:11136807-11136602 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 142-329 |
| Cow position: | chr29:4481085-4480885 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 22, 99 |
| Conread position: | 149-314 |
| Cow position: | chr29:1605422-1605247 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 306-636 |
| Cow position: | chr29:4218014-4218345 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 49, 202 |
| Conread position: | 311-639 |
| Cow position: | chr29:1688304-1688647 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 311-639 |
| Cow position: | chr29:28990298-28990625 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 23, 65 |
| Conread position: | 311-639 |
| Cow position: | chr29:45650985-45650658 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 92, 28 |
| Conread position: | 322-639 |
| Cow position: | chr29:3501741-3502074 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 333-572 |
| Cow position: | chr29:19124477-19124729 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 333-572 |
| Cow position: | chr29:24080285-24080536 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 333-609 |
| Cow position: | chr29:5977741-5977454 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 69, 163 |
| Conread position: | 333-620 |
| Cow position: | chr29:11136523-11136227 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 247 |
| Conread position: | 333-639 |
| Cow position: | chr29:2463327-2463029 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 70, 96 |
| Conread position: | 333-639 |
| Cow position: | chr29:11972648-11972966 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 55, 141 |
| Conread position: | 333-639 |
| Cow position: | chr29:19761645-19761955 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 51 |
| Conread position: | 333-639 |
| Cow position: | chr29:24659731-24659420 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 335-612 |
| Cow position: | chr29:12785442-12785173 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 336-638 |
| Cow position: | chr29:18084943-18085254 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 9 |
Show alignments to all cow chromosomes.