Cow genome map

Conread name: rnlu1830b_e5.y1

Conread position: 1-315
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 131

Conread position: 1-317
Cow position:
Alignm length: 334
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 154

Conread position: 1-318
Cow position:
Alignm length: 333
Alignm identity: 234
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 49, 70

Conread position: 1-318
Cow position:
Alignm length: 335
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 12

Conread position: 1-320
Cow position:
Alignm length: 339
Alignm identity: 232
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 49, 90

Conread position: 1-320
Cow position:
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 13

Conread position: 1-320
Cow position:
Alignm length: 338
Alignm identity: 225
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 12

Conread position: 1-321
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 139

Conread position: 1-321
Cow position:
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 120

Conread position: 1-321
Cow position:
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 79

Conread position: 1-321
Cow position:
Alignm length: 339
Alignm identity: 227
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 1-321
Cow position:
Alignm length: 329
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 50

Conread position: 1-321
Cow position:
Alignm length: 337
Alignm identity: 240
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 49, 104

Conread position: 1-321
Cow position:
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 131

Conread position: 1-321
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 120

Conread position: 1-321
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 90

Conread position: 1-321
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 130

Conread position: 1-321
Cow position:
Alignm length: 329
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 49, 255

Conread position: 1-322
Cow position:
Alignm length: 343
Alignm identity: 242
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 49, 120

Conread position: 1-322
Cow position:
Alignm length: 334
Alignm identity: 218
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 89

Conread position: 1-322
Cow position:
Alignm length: 341
Alignm identity: 243
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 49, 63

Conread position: 1-323
Cow position:
Alignm length: 334
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 50

Conread position: 1-323
Cow position:
Alignm length: 326
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 90

Conread position: 1-328
Cow position:
Alignm length: 357
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 36

Conread position: 1-329
Cow position:
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 139

Conread position: 1-330
Cow position:
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 130

Conread position: 1-402
Cow position:
Alignm length: 416
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 130

Conread position: 2-321
Cow position:
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 119

Conread position: 2-321
Cow position:
Alignm length: 329
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 138

Conread position: 2-321
Cow position:
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 2-321
Cow position:
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 129

Conread position: 2-329
Cow position:
Alignm length: 340
Alignm identity: 221
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 33

Conread position: 3-321
Cow position:
Alignm length: 333
Alignm identity: 226
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 92

Conread position: 3-326
Cow position:
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 134

Conread position: 5-317
Cow position:
Alignm length: 324
Alignm identity: 219
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 80

Conread position: 6-318
Cow position:
Alignm length: 334
Alignm identity: 224
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 85

Conread position: 7-317
Cow position:
Alignm length: 323
Alignm identity: 223
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 120

Conread position: 8-323
Cow position:
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 36-330
Cow position:
Alignm length: 312
Alignm identity: 220
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 40, 24

Conread position: 39-338
Cow position:
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 86

Conread position: 39-341
Cow position:
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 68

Conread position: 46-326
Cow position:
Alignm length: 293
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 93

Conread position: 56-327
Cow position:
Alignm length: 283
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 22

Conread position: 62-341
Cow position:
Alignm length: 293
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 78

Conread position: 119-321
Cow position:
Alignm length: 214
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 6

Conread position: 119-329
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 95, 78

Conread position: 134-318
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 57

Conread position: 135-328
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 138, 28

Conread position: 139-341
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 73, 162

Conread position: 155-319
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 112, 23

Conread position: 183-341
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 46

Conread position: 193-316
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 310-571
Cow position:
Alignm length: 275
Alignm identity: 204
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 0

Conread position: 311-530
Cow position:
Alignm length: 233
Alignm identity: 167
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 33, 156

Conread position: 311-572
Cow position:
Alignm length: 275
Alignm identity: 204
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 61

Conread position: 311-620
Cow position:
Alignm length: 323
Alignm identity: 227
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 25, 77

Conread position: 311-630
Cow position:
Alignm length: 337
Alignm identity: 230
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 29, 215

Conread position: 311-630
Cow position:
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 278

Conread position: 311-639
Cow position:
Alignm length: 343
Alignm identity: 237
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 311-639
Cow position:
Alignm length: 338
Alignm identity: 232
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 217

Conread position: 312-636
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 92

Conread position: 323-638
Cow position:
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 65

Conread position: 323-639
Cow position:
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 62

Conread position: 333-540
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 52

Conread position: 333-635
Cow position:
Alignm length: 321
Alignm identity: 226
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 47, 53

Conread position: 333-637
Cow position:
Alignm length: 328
Alignm identity: 219
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 333-639
Cow position:
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 39

Conread position: 333-639
Cow position:
Alignm length: 324
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 53

Conread position: 333-639
Cow position:
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 333-639
Cow position:
Alignm length: 311
Alignm identity: 216
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 74, 189

Conread position: 334-628
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 87, 105

Conread position: 334-639
Cow position:
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 59

Conread position: 342-639
Cow position:
Alignm length: 319
Alignm identity: 208
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 351-639
Cow position:
Alignm length: 305
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 165

Conread position: 354-568
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 0

Show alignments to all cow chromosomes.