Cow genome map


           Conread name:
           rnlu1830b_e5.y1
        

               Conread position:
               1-311
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               40, 229
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               247
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               49, 136
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               49, 119
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               49, 29
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 50
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               49, 140
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 128
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               49, 87
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 249
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               2-313
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               48, 32
               

               Conread position:
               2-317
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 122
               

               Conread position:
               2-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 22
               

               Conread position:
               3-327
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 167
               

               Conread position:
               4-328
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 15
               

               Conread position:
               6-330
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 120
               

               Conread position:
               7-319
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               30-322
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               41-323
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               46-318
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               30, 117
               

               Conread position:
               46-329
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               46-330
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               55-321
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               61-321
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               15, 117
               

               Conread position:
               123-341
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               130, 121
               

               Conread position:
               125-321
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               128-317
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               139, 25
               

               Conread position:
               138-321
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               139-319
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               129, 58
               

               Conread position:
               139-325
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               160-320
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               102, 64
               

               Conread position:
               169-330
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               170-327
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               297-537
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               99, 145
               

               Conread position:
               307-639
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 297
               

               Conread position:
               307-639
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 95
               

               Conread position:
               311-638
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 87
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 76
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 115
               

               Conread position:
               323-518
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               333-496
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               333-517
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 116
               

               Conread position:
               333-530
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               74, 177
               

               Conread position:
               333-633
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 192
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               74, 246
               

               Conread position:
               334-636
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               69, 103
               

               Conread position:
               334-636
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               336-629
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               339-636
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               339-639
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 46
               

               Conread position:
               339-639
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 27
               

               Conread position:
               344-639
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 153
               

               Conread position:
               351-559
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               52, 153
               

               Conread position:
               363-639
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               41, 82
               
Show alignments to all cow chromosomes.