Cow genome map


           Conread name:
           rnlu1830b_e5.y1
        

               Conread position:
               1-313
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 7
               

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 113
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 105
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 122
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               49, 29
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               49, 23
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 81
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               18, 129
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 22
               

               Conread position:
               1-341
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 41
               

               Conread position:
               1-567
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 44
               

               Conread position:
               2-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 119
               

               Conread position:
               2-329
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 124
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 146
               

               Conread position:
               5-320
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               21, 39
               

               Conread position:
               5-329
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               7-321
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               42, 122
               

               Conread position:
               12-321
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               38, 156
               

               Conread position:
               44-322
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               21, 5
               

               Conread position:
               64-324
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               198, 14
               

               Conread position:
               65-320
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               109-321
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               158, 114
               

               Conread position:
               120-324
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               8, 18
               

               Conread position:
               155-321
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               98, 22
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               25, 241
               

               Conread position:
               323-636
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               81, 162
               

               Conread position:
               323-639
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               331-639
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 8
               

               Conread position:
               332-636
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               333-501
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               333-573
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               71, 108
               

               Conread position:
               333-574
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 120
               

               Conread position:
               333-609
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               333-636
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               41, 193
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 58
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               70, 48
               

               Conread position:
               339-639
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 48
               

               Conread position:
               352-636
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               52, 182
               
Show alignments to all cow chromosomes.