Cow genome map


           Conread name:
           rnlu1830b_e5.y1
        

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 110
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               46, 72
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 139
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 79
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 25
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 190
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 12
               

               Conread position:
               1-341
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 122
               

               Conread position:
               1-402
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               2-319
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 100
               

               Conread position:
               2-322
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               47, 93
               

               Conread position:
               4-321
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               46, 68
               

               Conread position:
               5-334
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               41, 142
               

               Conread position:
               6-325
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 86
               

               Conread position:
               7-320
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               31, 115
               

               Conread position:
               7-321
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               43, 114
               

               Conread position:
               7-321
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 132
               

               Conread position:
               7-321
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               236
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               36, 134
               

               Conread position:
               7-321
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 124
               

               Conread position:
               9-341
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               28-320
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 67
               

               Conread position:
               28-335
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               225, 15
               

               Conread position:
               31-410
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               260
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               49-329
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 117
               

               Conread position:
               56-322
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               183, 59
               

               Conread position:
               75-318
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               79-329
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               183, 81
               

               Conread position:
               109-329
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               152, 10
               

               Conread position:
               113-323
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               147, 25
               

               Conread position:
               133-321
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               165-316
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               311-562
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               311-630
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               311-640
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               25, 164
               

               Conread position:
               323-635
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               323-639
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               333-572
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               333-630
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 95
               

               Conread position:
               334-572
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               46, 52
               

               Conread position:
               334-636
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 13
               

               Conread position:
               341-640
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 182
               
Show alignments to all cow chromosomes.