Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-318 |
| Cow position: | chr7:21124459-21124126 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 130 |
| Conread position: | 1-318 |
| Cow position: | chr7:42594332-42594005 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 137 |
| Conread position: | 1-318 |
| Cow position: | chr7:55688767-55688437 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 165 |
| Conread position: | 1-319 |
| Cow position: | chr7:56887800-56887466 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-319 |
| Cow position: | chr7:69132479-69132804 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 1-320 |
| Cow position: | chr7:5250955-5250622 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 1-320 |
| Cow position: | chr7:23457802-23457470 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 126 |
| Conread position: | 1-321 |
| Cow position: | chr7:8140872-8140536 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-321 |
| Cow position: | chr7:16934514-16934851 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr7:29363780-29363458 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 1-321 |
| Cow position: | chr7:46749196-46749528 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 106 |
| Conread position: | 1-321 |
| Cow position: | chr7:47190532-47190197 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr7:53070338-53070667 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-321 |
| Cow position: | chr7:59774522-59774853 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 1-321 |
| Cow position: | chr7:64238849-64238514 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr7:69065471-69065807 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-322 |
| Cow position: | chr7:21877512-21877175 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 1-323 |
| Cow position: | chr7:467375-467029 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 196 |
| Conread position: | 1-324 |
| Cow position: | chr7:60741729-60741392 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 1-328 |
| Cow position: | chr7:59559170-59558831 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 1-329 |
| Cow position: | chr7:19463637-19463293 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-329 |
| Cow position: | chr7:47045464-47045778 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 39 |
| Conread position: | 1-330 |
| Cow position: | chr7:39795077-39795422 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-406 |
| Cow position: | chr7:32713404-32712998 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 2-321 |
| Cow position: | chr7:39400942-39401277 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 2-321 |
| Cow position: | chr7:64329885-64330209 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 136 |
| Conread position: | 2-325 |
| Cow position: | chr7:19467285-19466947 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 152 |
| Conread position: | 2-342 |
| Cow position: | chr7:48860526-48860166 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 3-329 |
| Cow position: | chr7:67759444-67759773 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 46, 77 |
| Conread position: | 5-318 |
| Cow position: | chr7:47910105-47909777 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 5-319 |
| Cow position: | chr7:35276255-35275950 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 5-322 |
| Cow position: | chr7:62732189-62732525 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 6-327 |
| Cow position: | chr7:41463249-41463584 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 7-323 |
| Cow position: | chr7:58900309-58900630 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 121 |
| Conread position: | 9-324 |
| Cow position: | chr7:21009937-21009620 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 27 |
| Conread position: | 20-319 |
| Cow position: | chr7:48242430-48242743 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 120 |
| Conread position: | 26-322 |
| Cow position: | chr7:39902581-39902890 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 46-328 |
| Cow position: | chr7:36472215-36472506 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 124 |
| Conread position: | 57-371 |
| Cow position: | chr7:23277225-23276905 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 240 |
| Conread position: | 78-317 |
| Cow position: | chr7:4451659-4451906 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 54 |
| Conread position: | 87-318 |
| Cow position: | chr7:68575443-68575672 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 147, 109 |
| Conread position: | 102-321 |
| Cow position: | chr7:57209525-57209297 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 128-324 |
| Cow position: | chr7:13821633-13821838 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 6 |
| Conread position: | 139-318 |
| Cow position: | chr7:48274870-48274681 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 140-329 |
| Cow position: | chr7:29727869-29727671 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 143-321 |
| Cow position: | chr7:25685902-25685719 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 143-324 |
| Cow position: | chr7:60489137-60489328 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 162-320 |
| Cow position: | chr7:30115578-30115410 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 277-567 |
| Cow position: | chr7:4156450-4156161 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 21, 133 |
| Conread position: | 297-487 |
| Cow position: | chr7:23472690-23472487 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 307-638 |
| Cow position: | chr7:250091-249770 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 100, 65 |
| Conread position: | 311-636 |
| Cow position: | chr7:39020711-39020374 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 311-638 |
| Cow position: | chr7:21326438-21326770 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 233 |
| Conread position: | 311-639 |
| Cow position: | chr7:442646-442318 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 105 |
| Conread position: | 323-634 |
| Cow position: | chr7:1815961-1815642 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 140 |
| Conread position: | 323-639 |
| Cow position: | chr7:34422891-34422584 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 333-527 |
| Cow position: | chr7:8728969-8729163 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 68, 57 |
| Conread position: | 333-567 |
| Cow position: | chr7:61602401-61602160 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 56, 110 |
| Conread position: | 333-636 |
| Cow position: | chr7:15566175-15566494 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 333-639 |
| Cow position: | chr7:21315519-21315832 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 70, 134 |
| Conread position: | 333-639 |
| Cow position: | chr7:22358070-22357765 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 333-639 |
| Cow position: | chr7:40301156-40300836 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 71, 79 |
| Conread position: | 334-486 |
| Cow position: | chr7:5849674-5849515 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 338-561 |
| Cow position: | chr7:59986210-59986437 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 339-639 |
| Cow position: | chr7:23477888-23477581 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 95 |
| Conread position: | 342-630 |
| Cow position: | chr7:60945631-60945920 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 37, 46 |
| Conread position: | 351-577 |
| Cow position: | chr7:21521574-21521801 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 52, 191 |
Show alignments to all cow chromosomes.