Cow genome map
| Conread name: | rnlu1830b_e5.y1 |
| Conread position: | 1-318 |
| Cow position: | chr8:50283823-50283490 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-319 |
| Cow position: | chr8:8386935-8387268 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 143 |
| Conread position: | 1-319 |
| Cow position: | chr8:9994842-9995178 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 48, 95 |
| Conread position: | 1-320 |
| Cow position: | chr8:19052681-19053014 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 1-321 |
| Cow position: | chr8:2823762-2823428 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 1-321 |
| Cow position: | chr8:8468669-8469005 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-321 |
| Cow position: | chr8:11118556-11118227 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-321 |
| Cow position: | chr8:25671687-25672022 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-322 |
| Cow position: | chr8:41263278-41263617 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 248 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 49, 90 |
| Conread position: | 1-323 |
| Cow position: | chr8:9237786-9237455 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 1-325 |
| Cow position: | chr8:11592667-11592991 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 17, 80 |
| Conread position: | 1-329 |
| Cow position: | chr8:3853495-3853154 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-329 |
| Cow position: | chr8:41950576-41950909 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 1-330 |
| Cow position: | chr8:22030509-22030854 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 2-317 |
| Cow position: | chr8:8532162-8531837 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 2-321 |
| Cow position: | chr8:50316150-50315825 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 245 |
| Conread position: | 2-321 |
| Cow position: | chr8:50927708-50927374 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 129 |
| Conread position: | 2-323 |
| Cow position: | chr8:51603489-51603153 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 129 |
| Conread position: | 2-327 |
| Cow position: | chr8:33692376-33692700 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 74, 48 |
| Conread position: | 2-344 |
| Cow position: | chr8:5244046-5243688 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 206 |
| Conread position: | 2-372 |
| Cow position: | chr8:6330088-6330476 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 3-317 |
| Cow position: | chr8:27956564-27956242 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 216 |
| Conread position: | 3-329 |
| Cow position: | chr8:21219121-21219447 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 4-329 |
| Cow position: | chr8:8009792-8010134 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 243 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 4-329 |
| Cow position: | chr8:13558664-13559003 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 46, 88 |
| Conread position: | 7-321 |
| Cow position: | chr8:60266784-60267098 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 250, 43 |
| Conread position: | 8-324 |
| Cow position: | chr8:20675173-20674844 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 116 |
| Conread position: | 9-324 |
| Cow position: | chr8:34397208-34397530 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 121 |
| Conread position: | 9-360 |
| Cow position: | chr8:11781337-11781705 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 264 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 10-325 |
| Cow position: | chr8:5679711-5679389 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 120 |
| Conread position: | 14-337 |
| Cow position: | chr8:6077550-6077234 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 27 |
| Conread position: | 29-322 |
| Cow position: | chr8:21948837-21948524 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 39-319 |
| Cow position: | chr8:17268416-17268135 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 94 |
| Conread position: | 46-323 |
| Cow position: | chr8:37534463-37534751 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 52-329 |
| Cow position: | chr8:18991847-18991559 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 59-293 |
| Cow position: | chr8:28883818-28884046 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 100-320 |
| Cow position: | chr8:52862483-52862706 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 162, 55 |
| Conread position: | 124-321 |
| Cow position: | chr8:23774419-23774626 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 96, 78 |
| Conread position: | 139-329 |
| Cow position: | chr8:28150874-28150675 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 122, 99 |
| Conread position: | 146-320 |
| Cow position: | chr8:12813937-12814119 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 121, 61 |
| Conread position: | 147-316 |
| Cow position: | chr8:33993268-33993446 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 120, 33 |
| Conread position: | 152-341 |
| Cow position: | chr8:36859051-36858856 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 153 |
| Conread position: | 180-320 |
| Cow position: | chr8:47678573-47678722 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 29 |
| Conread position: | 310-638 |
| Cow position: | chr8:21212159-21212485 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 73 |
| Conread position: | 311-639 |
| Cow position: | chr8:47466584-47466246 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 323-529 |
| Cow position: | chr8:54525856-54526059 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 333-575 |
| Cow position: | chr8:10802766-10802522 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 70, 239 |
| Conread position: | 333-614 |
| Cow position: | chr8:4274045-4274324 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 70, 181 |
| Conread position: | 333-638 |
| Cow position: | chr8:27659000-27659315 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 334-637 |
| Cow position: | chr8:31253186-31253498 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 69, 89 |
| Conread position: | 339-572 |
| Cow position: | chr8:50315729-50315500 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 64, 134 |
| Conread position: | 339-639 |
| Cow position: | chr8:29030796-29030480 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 340-639 |
| Cow position: | chr8:11078243-11078560 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 242 |
Show alignments to all cow chromosomes.