Cow genome map


           Conread name:
           rnlu1830b_e5.y1
        

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 121
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 65
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 82
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               261, 24
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 119
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 125
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 154
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 124
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 19
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               255
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               49, 200
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               49, 240
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 229
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               76, 49
               

               Conread position:
               2-322
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 35
               

               Conread position:
               2-329
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               48, 175
               

               Conread position:
               3-322
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               47, 21
               

               Conread position:
               3-325
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               47, 25
               

               Conread position:
               4-338
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               45, 89
               

               Conread position:
               7-329
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               8-322
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               259, 0
               

               Conread position:
               8-323
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 72
               

               Conread position:
               27-326
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 169
               

               Conread position:
               28-318
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               75-321
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               100-320
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               163, 141
               

               Conread position:
               120-320
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               147, 14
               

               Conread position:
               133-314
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               134, 56
               

               Conread position:
               133-317
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               147-326
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               149-320
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               185-321
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 271
               

               Conread position:
               311-639
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               25, 138
               

               Conread position:
               317-638
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 90
               

               Conread position:
               319-535
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               333-562
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               70, 96
               

               Conread position:
               333-563
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               42, 53
               

               Conread position:
               333-564
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               70, 121
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 53
               

               Conread position:
               334-639
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 144
               

               Conread position:
               339-639
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               64, 108
               

               Conread position:
               351-639
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               53, 273
               
Show alignments to all cow chromosomes.