Cow genome map
| Conread name: | rnlu1834b_h15.y1 |
| Conread position: | 12-382 |
| Cow position: | chr10:17179437-17179051 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 67 |
| Conread position: | 25-366 |
| Cow position: | chr10:26023390-26023739 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 106 |
| Conread position: | 36-370 |
| Cow position: | chr10:28854818-28854484 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 110 |
| Conread position: | 37-370 |
| Cow position: | chr10:10223364-10223702 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 55-370 |
| Cow position: | chr10:29495867-29495558 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 73-370 |
| Cow position: | chr10:66427485-66427783 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 23, 71 |
| Conread position: | 86-315 |
| Cow position: | chr10:69685832-69685597 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 139, 79 |
| Conread position: | 142-370 |
| Cow position: | chr10:16804369-16804136 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 106 |
| Conread position: | 144-297 |
| Cow position: | chr10:58840548-58840703 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-298 |
| Cow position: | chr10:42675500-42675344 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 144-323 |
| Cow position: | chr10:50527707-50527529 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 144-349 |
| Cow position: | chr10:34806642-34806441 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 144-356 |
| Cow position: | chr10:36474650-36474860 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 83, 91 |
| Conread position: | 144-366 |
| Cow position: | chr10:16951155-16951377 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 78, 110 |
| Conread position: | 144-367 |
| Cow position: | chr10:68370668-68370896 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 73, 100 |
| Conread position: | 144-370 |
| Cow position: | chr10:592829-592604 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 83, 49 |
| Conread position: | 144-370 |
| Cow position: | chr10:3648716-3648487 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 84, 103 |
| Conread position: | 144-385 |
| Cow position: | chr10:32981079-32981317 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 144-385 |
| Cow position: | chr10:52666818-52666578 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 146-273 |
| Cow position: | chr10:29098800-29098676 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 149-348 |
| Cow position: | chr10:23734076-23734275 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 76, 98 |
| Conread position: | 149-349 |
| Cow position: | chr10:52647454-52647650 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 91 |
| Conread position: | 149-354 |
| Cow position: | chr10:15381452-15381663 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 68, 99 |
| Conread position: | 149-354 |
| Cow position: | chr10:19651588-19651380 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 100 |
| Conread position: | 149-357 |
| Cow position: | chr10:726508-726722 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 72, 97 |
| Conread position: | 149-366 |
| Cow position: | chr10:62613448-62613236 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 79, 52 |
| Conread position: | 149-370 |
| Cow position: | chr10:4909061-4909285 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-376 |
| Cow position: | chr10:67566870-67567097 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 78, 152 |
| Conread position: | 149-380 |
| Cow position: | chr10:55917328-55917551 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 216, 35 |
| Conread position: | 149-385 |
| Cow position: | chr10:46395814-46395580 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-385 |
| Cow position: | chr10:63475460-63475229 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 99 |
| Conread position: | 150-349 |
| Cow position: | chr10:55305429-55305625 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 77, 97 |
| Conread position: | 150-370 |
| Cow position: | chr10:12537795-12537574 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 77, 98 |
| Conread position: | 151-349 |
| Cow position: | chr10:40428533-40428731 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 76, 96 |
| Conread position: | 151-385 |
| Cow position: | chr10:23765502-23765734 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 156-363 |
| Cow position: | chr10:21373079-21372873 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 71, 28 |
| Conread position: | 157-297 |
| Cow position: | chr10:38435331-38435474 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 70, 90 |
| Conread position: | 167-354 |
| Cow position: | chr10:10756134-10755937 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 179-351 |
| Cow position: | chr10:52420894-52421067 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 14 |
| Conread position: | 182-352 |
| Cow position: | chr10:42673542-42673362 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 195-385 |
| Cow position: | chr10:13333975-13333784 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 56 |
Show alignments to all cow chromosomes.