Cow genome map
| Conread name: | rnlu1834b_h15.y1 |
| Conread position: | 25-226 |
| Cow position: | chr12:32865603-32865806 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 13, 68 |
| Conread position: | 25-366 |
| Cow position: | chr12:5982528-5982169 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 69 |
| Conread position: | 27-370 |
| Cow position: | chr12:15131592-15131943 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 63-370 |
| Cow position: | chr12:31871195-31870883 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 63-370 |
| Cow position: | chr12:36069407-36069095 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 66-343 |
| Cow position: | chr12:45704080-45703802 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 89-355 |
| Cow position: | chr12:6931881-6931607 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 7, 52 |
| Conread position: | 105-394 |
| Cow position: | chr12:16081913-16081620 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 34 |
| Conread position: | 142-348 |
| Cow position: | chr12:31608852-31608639 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 85, 105 |
| Conread position: | 144-278 |
| Cow position: | chr12:15365743-15365607 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 103 |
| Conread position: | 144-297 |
| Cow position: | chr12:9276893-9277048 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-297 |
| Cow position: | chr12:30446515-30446359 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 83, 102 |
| Conread position: | 144-349 |
| Cow position: | chr12:5251095-5251296 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 83, 106 |
| Conread position: | 144-349 |
| Cow position: | chr12:8963563-8963764 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-354 |
| Cow position: | chr12:30531717-30531930 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 134, 93 |
| Conread position: | 144-358 |
| Cow position: | chr12:20225497-20225708 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 130, 101 |
| Conread position: | 144-362 |
| Cow position: | chr12:11213096-11213318 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 71, 101 |
| Conread position: | 144-363 |
| Cow position: | chr12:26292732-26292508 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 79, 102 |
| Conread position: | 144-370 |
| Cow position: | chr12:39177717-39177495 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 155, 74 |
| Conread position: | 144-380 |
| Cow position: | chr12:30231913-30231677 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 55, 109 |
| Conread position: | 149-345 |
| Cow position: | chr12:9014133-9013940 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-349 |
| Cow position: | chr12:27133405-27133602 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-370 |
| Cow position: | chr12:16908817-16908596 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 71 |
| Conread position: | 149-395 |
| Cow position: | chr12:4146311-4146061 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 99 |
| Conread position: | 151-386 |
| Cow position: | chr12:34597940-34597704 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 76, 96 |
| Conread position: | 154-362 |
| Cow position: | chr12:39937315-39937528 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 22, 15 |
| Conread position: | 155-349 |
| Cow position: | chr12:36251474-36251661 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 93 |
| Conread position: | 156-347 |
| Cow position: | chr12:39115194-39115004 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 71, 91 |
| Conread position: | 156-367 |
| Cow position: | chr12:15072927-15072719 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 71, 91 |
| Conread position: | 159-363 |
| Cow position: | chr12:39551765-39551975 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 63, 89 |
| Conread position: | 167-367 |
| Cow position: | chr12:42786257-42786056 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 82 |
| Conread position: | 167-381 |
| Cow position: | chr12:41777828-41778045 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 114, 52 |
| Conread position: | 175-397 |
| Cow position: | chr12:35638734-35638956 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 70 |
| Conread position: | 177-348 |
| Cow position: | chr12:16352494-16352312 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 179-370 |
| Cow position: | chr12:42941061-42940866 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 69 |
| Conread position: | 181-366 |
| Cow position: | chr12:40548984-40549178 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 67 |
Show alignments to all cow chromosomes.