Cow genome map
| Conread name: | rnlu1834b_h15.y1 |
| Conread position: | 25-370 |
| Cow position: | chr13:41201351-41201702 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 15, 25 |
| Conread position: | 38-348 |
| Cow position: | chr13:48204105-48203801 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 40-370 |
| Cow position: | chr13:56232042-56231712 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 14, 60 |
| Conread position: | 42-316 |
| Cow position: | chr13:17129915-17129627 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 62-370 |
| Cow position: | chr13:26366948-26367261 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 63-274 |
| Cow position: | chr13:20460595-20460802 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 63-367 |
| Cow position: | chr13:8643734-8644045 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 25 |
| Conread position: | 63-370 |
| Cow position: | chr13:44433677-44433985 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 33, 65 |
| Conread position: | 73-267 |
| Cow position: | chr13:51135807-51135616 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 154, 68 |
| Conread position: | 96-370 |
| Cow position: | chr13:6350098-6349824 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 44 |
| Conread position: | 142-394 |
| Cow position: | chr13:55952737-55952995 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 132, 102 |
| Conread position: | 144-316 |
| Cow position: | chr13:51091273-51091095 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-344 |
| Cow position: | chr13:12986227-12986031 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 144-370 |
| Cow position: | chr13:13498503-13498277 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 72, 100 |
| Conread position: | 144-370 |
| Cow position: | chr13:17935707-17935473 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 73, 104 |
| Conread position: | 144-370 |
| Cow position: | chr13:25343196-25342966 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 85, 49 |
| Conread position: | 144-370 |
| Cow position: | chr13:31437523-31437292 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 75, 101 |
| Conread position: | 144-370 |
| Cow position: | chr13:53826874-53826643 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 84, 102 |
| Conread position: | 144-376 |
| Cow position: | chr13:34720310-34720090 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 149-312 |
| Cow position: | chr13:27228207-27228039 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 99 |
| Conread position: | 149-355 |
| Cow position: | chr13:56227594-56227379 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-370 |
| Cow position: | chr13:19327920-19328147 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 150-263 |
| Cow position: | chr13:22944601-22944716 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 77, 97 |
| Conread position: | 150-274 |
| Cow position: | chr13:25347478-25347352 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 77, 97 |
| Conread position: | 150-315 |
| Cow position: | chr13:14610728-14610900 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 77, 96 |
| Conread position: | 150-366 |
| Cow position: | chr13:15853452-15853667 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 77, 11 |
| Conread position: | 150-370 |
| Cow position: | chr13:20630706-20630484 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 77, 98 |
| Conread position: | 157-395 |
| Cow position: | chr13:20268144-20267895 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 70, 55 |
| Conread position: | 182-366 |
| Cow position: | chr13:2772516-2772323 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 35, 66 |
Show alignments to all cow chromosomes.