Cow genome map
| Conread name: | rnlu1834b_h15.y1 |
| Conread position: | 21-370 |
| Cow position: | chr14:45572237-45572607 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 22, 73 |
| Conread position: | 25-358 |
| Cow position: | chr14:46582884-46582539 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 25-370 |
| Cow position: | chr14:14779181-14778825 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 37-370 |
| Cow position: | chr14:25988459-25988799 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 37-370 |
| Cow position: | chr14:46564591-46564931 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 31, 9 |
| Conread position: | 40-254 |
| Cow position: | chr14:42409346-42409562 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 41-367 |
| Cow position: | chr14:46046412-46046076 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 63-370 |
| Cow position: | chr14:12299511-12299824 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 31, 79 |
| Conread position: | 63-370 |
| Cow position: | chr14:48105130-48104824 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 80 |
| Conread position: | 77-370 |
| Cow position: | chr14:29712565-29712273 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 79-436 |
| Cow position: | chr14:31380795-31380433 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 96-286 |
| Cow position: | chr14:46952777-46952961 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 131, 44 |
| Conread position: | 98-314 |
| Cow position: | chr14:44481380-44481167 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 144-297 |
| Cow position: | chr14:8217397-8217547 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 89, 49 |
| Conread position: | 144-348 |
| Cow position: | chr14:33595207-33595418 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-349 |
| Cow position: | chr14:37448114-37447909 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 74, 105 |
| Conread position: | 144-356 |
| Cow position: | chr14:24385728-24385936 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 144-362 |
| Cow position: | chr14:11672414-11672175 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-366 |
| Cow position: | chr14:35049346-35049570 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 77, 102 |
| Conread position: | 144-370 |
| Cow position: | chr14:25170671-25170439 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 83, 52 |
| Conread position: | 144-370 |
| Cow position: | chr14:32723820-32724052 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 83, 23 |
| Conread position: | 144-385 |
| Cow position: | chr14:35172778-35172536 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 89, 101 |
| Conread position: | 149-295 |
| Cow position: | chr14:21998512-21998655 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 149-370 |
| Cow position: | chr14:2326578-2326795 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 101 |
| Conread position: | 149-370 |
| Cow position: | chr14:32797728-32797950 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 150-320 |
| Cow position: | chr14:43219979-43219808 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 96 |
| Conread position: | 150-385 |
| Cow position: | chr14:43680110-43680331 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 77, 16 |
| Conread position: | 151-370 |
| Cow position: | chr14:21875407-21875189 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 71, 96 |
| Conread position: | 151-385 |
| Cow position: | chr14:3332711-3332475 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 105 |
| Conread position: | 154-370 |
| Cow position: | chr14:3925933-3925704 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 35, 94 |
| Conread position: | 161-366 |
| Cow position: | chr14:46398264-46398479 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 61, 86 |
| Conread position: | 167-353 |
| Cow position: | chr14:1479883-1480079 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 167-367 |
| Cow position: | chr14:45763864-45763661 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 54, 79 |
| Conread position: | 169-371 |
| Cow position: | chr14:3168378-3168583 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 58, 79 |
| Conread position: | 173-362 |
| Cow position: | chr14:23312947-23312754 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 80 |
| Conread position: | 182-366 |
| Cow position: | chr14:14643342-14643149 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 45, 66 |
Show alignments to all cow chromosomes.