Cow genome map

Conread name: rnlu1834b_h15.y1

Conread position: 18-242
Cow position: chr15:10609954-10610183 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 132

Conread position: 25-273
Cow position: chr15:11759667-11759915 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 28

Conread position: 25-370
Cow position: chr15:6447091-6447450 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 13, 71

Conread position: 38-367
Cow position: chr15:19728659-19728991 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 28, 54

Conread position: 40-353
Cow position: chr15:33611561-33611890 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 230
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 47

Conread position: 41-351
Cow position: chr15:45696250-45696563 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 13

Conread position: 41-367
Cow position: chr15:50442297-50441969 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 13

Conread position: 63-362
Cow position: chr15:18675528-18675830 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 79

Conread position: 63-363
Cow position: chr15:25466414-25466115 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 26

Conread position: 66-370
Cow position: chr15:8439426-8439734 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 78

Conread position: 73-354
Cow position: chr15:49130108-49130383 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 21, 11

Conread position: 77-361
Cow position: chr15:15632573-15632853 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 10, 23

Conread position: 77-370
Cow position: chr15:44997763-44998061 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 19, 11

Conread position: 99-370
Cow position: chr15:1304583-1304311 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 17, 42

Conread position: 105-367
Cow position: chr15:51241110-51241372 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 106, 31

Conread position: 144-348
Cow position: chr15:18280250-18280049 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 109

Conread position: 144-363
Cow position: chr15:35449480-35449706 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 83, 103

Conread position: 144-368
Cow position: chr15:29656652-29656424 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 162

Conread position: 144-370
Cow position: chr15:14470776-14471008 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 103

Conread position: 144-370
Cow position: chr15:16431985-16431754 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 41, 101

Conread position: 144-374
Cow position: chr15:22548311-22548082 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 98

Conread position: 144-374
Cow position: chr15:48107453-48107687 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 31, 103

Conread position: 144-380
Cow position: chr15:18212825-18213071 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 112

Conread position: 144-380
Cow position: chr15:47623149-47623382 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 77, 103

Conread position: 144-385
Cow position: chr15:12799339-12799578 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 78, 102

Conread position: 144-385
Cow position: chr15:22579421-22579182 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 104

Conread position: 144-385
Cow position: chr15:24399792-24399549 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 83, 103

Conread position: 149-349
Cow position: chr15:8439008-8439208 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 104

Conread position: 149-354
Cow position: chr15:17005465-17005257 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 101

Conread position: 149-363
Cow position: chr15:42659995-42659775 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 78, 101

Conread position: 149-363
Cow position: chr15:45509587-45509806 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 98

Conread position: 149-366
Cow position: chr15:17189745-17189966 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 124, 54

Conread position: 149-385
Cow position: chr15:19934842-19934607 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 98

Conread position: 149-386
Cow position: chr15:13994736-13994500 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 152

Conread position: 149-389
Cow position: chr15:34170586-34170348 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 78, 98

Conread position: 151-385
Cow position: chr15:37110274-37110507 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 150

Conread position: 156-356
Cow position: chr15:53189397-53189594 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 91

Conread position: 156-380
Cow position: chr15:22516634-22516408 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 72, 91

Conread position: 159-394
Cow position: chr15:20128654-20128897 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 63, 95

Conread position: 161-354
Cow position: chr15:50547827-50547624 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 89

Conread position: 167-370
Cow position: chr15:32659982-32660182 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 60, 80

Conread position: 175-359
Cow position: chr15:8949009-8949197 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 43, 76

Conread position: 180-354
Cow position: chr15:26171081-26170900 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 97

Conread position: 182-363
Cow position: chr15:6309488-6309298 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 67

Conread position: 182-366
Cow position: chr15:32432391-32432580 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 66

Show alignments to all cow chromosomes.