Cow genome map
| Conread name: | rnlu1834b_h15.y1 |
| Conread position: | 25-354 |
| Cow position: | chr16:44460287-44460625 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 13, 121 |
| Conread position: | 25-361 |
| Cow position: | chr16:412048-412384 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 124 |
| Conread position: | 25-371 |
| Cow position: | chr16:48895639-48895988 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 38-367 |
| Cow position: | chr16:13513220-13513560 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 40-297 |
| Cow position: | chr16:33377590-33377335 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 40-370 |
| Cow position: | chr16:10669605-10669275 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 73-370 |
| Cow position: | chr16:17162951-17162650 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 6, 46 |
| Conread position: | 77-297 |
| Cow position: | chr16:571521-571304 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 77-367 |
| Cow position: | chr16:40521911-40522203 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 77-370 |
| Cow position: | chr16:37100654-37100941 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 119-394 |
| Cow position: | chr16:49910797-49911077 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 129-273 |
| Cow position: | chr16:34028110-34028248 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 108, 11 |
| Conread position: | 142-348 |
| Cow position: | chr16:11484609-11484822 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 85, 105 |
| Conread position: | 142-354 |
| Cow position: | chr16:10337453-10337663 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 142-367 |
| Cow position: | chr16:50508000-50508228 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 144-230 |
| Cow position: | chr16:15258121-15258207 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 76 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 144-284 |
| Cow position: | chr16:23923733-23923590 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 65, 104 |
| Conread position: | 144-297 |
| Cow position: | chr16:4141487-4141333 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 84, 56 |
| Conread position: | 144-338 |
| Cow position: | chr16:6725144-6725333 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-354 |
| Cow position: | chr16:14182768-14182559 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 72, 89 |
| Conread position: | 144-370 |
| Cow position: | chr16:33439366-33439613 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-370 |
| Cow position: | chr16:40501817-40501588 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 144-370 |
| Cow position: | chr16:43861053-43861286 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 83, 15 |
| Conread position: | 144-386 |
| Cow position: | chr16:33710627-33710862 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 103 |
| Conread position: | 144-395 |
| Cow position: | chr16:10179023-10178765 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 83, 102 |
| Conread position: | 144-395 |
| Cow position: | chr16:35447253-35447504 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 52, 109 |
| Conread position: | 149-293 |
| Cow position: | chr16:21725800-21725947 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-316 |
| Cow position: | chr16:40415728-40415563 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-338 |
| Cow position: | chr16:55132487-55132673 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-345 |
| Cow position: | chr16:17734459-17734267 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-362 |
| Cow position: | chr16:40511458-40511252 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 79, 98 |
| Conread position: | 149-385 |
| Cow position: | chr16:48799891-48800124 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 98 |
| Conread position: | 149-393 |
| Cow position: | chr16:33531443-33531201 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 125, 96 |
| Conread position: | 156-370 |
| Cow position: | chr16:33435631-33435848 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 71, 92 |
| Conread position: | 159-297 |
| Cow position: | chr16:19262960-19263098 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 63, 90 |
| Conread position: | 159-297 |
| Cow position: | chr16:22243822-22243684 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 8 |
| Conread position: | 159-366 |
| Cow position: | chr16:35415419-35415632 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 63, 89 |
| Conread position: | 163-356 |
| Cow position: | chr16:5784445-5784253 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 64, 43 |
| Conread position: | 175-370 |
| Cow position: | chr16:12004667-12004469 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 175-379 |
| Cow position: | chr16:56209796-56209583 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 26, 78 |
| Conread position: | 176-347 |
| Cow position: | chr16:47366378-47366551 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 123, 68 |
| Conread position: | 179-352 |
| Cow position: | chr16:12093005-12092828 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 70 |
| Conread position: | 181-366 |
| Cow position: | chr16:7433552-7433733 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 46, 67 |
| Conread position: | 181-394 |
| Cow position: | chr16:10933413-10933188 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 182-370 |
| Cow position: | chr16:52619321-52619517 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 66 |
Show alignments to all cow chromosomes.