Cow genome map
| Conread name: | rnlu1834b_h15.y1 |
| Conread position: | 12-276 |
| Cow position: | chr18:25670509-25670237 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 24-366 |
| Cow position: | chr18:4699244-4699592 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 35, 119 |
| Conread position: | 25-276 |
| Cow position: | chr18:30228415-30228663 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 25-348 |
| Cow position: | chr18:29884686-29885008 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 38-358 |
| Cow position: | chr18:51804170-51803847 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 108 |
| Conread position: | 40-370 |
| Cow position: | chr18:51780073-51779749 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 78-370 |
| Cow position: | chr18:24799148-24798855 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 79-393 |
| Cow position: | chr18:46883205-46883526 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 88-341 |
| Cow position: | chr18:11268719-11268460 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 133-358 |
| Cow position: | chr18:3689486-3689266 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 94, 8 |
| Conread position: | 142-354 |
| Cow position: | chr18:54063683-54063466 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 56, 112 |
| Conread position: | 142-367 |
| Cow position: | chr18:25700785-25700556 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 79, 58 |
| Conread position: | 142-370 |
| Cow position: | chr18:13788391-13788157 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 85, 104 |
| Conread position: | 144-329 |
| Cow position: | chr18:47293871-47294056 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 149-297 |
| Cow position: | chr18:46864965-46865115 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 79, 98 |
| Conread position: | 149-323 |
| Cow position: | chr18:8283987-8283816 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-345 |
| Cow position: | chr18:9257458-9257265 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 98 |
| Conread position: | 149-345 |
| Cow position: | chr18:15807406-15807598 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 91 |
| Conread position: | 149-345 |
| Cow position: | chr18:15946403-15946595 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 91 |
| Conread position: | 149-345 |
| Cow position: | chr18:49386305-49386498 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 79, 98 |
| Conread position: | 149-366 |
| Cow position: | chr18:40701919-40701704 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 53, 105 |
| Conread position: | 149-380 |
| Cow position: | chr18:12779152-12778916 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 78, 40 |
| Conread position: | 149-385 |
| Cow position: | chr18:54128375-54128140 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-394 |
| Cow position: | chr18:35087135-35086882 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 150-357 |
| Cow position: | chr18:9017818-9017605 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 75, 104 |
| Conread position: | 156-386 |
| Cow position: | chr18:52440208-52440434 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 91 |
| Conread position: | 170-381 |
| Cow position: | chr18:48310374-48310587 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 57, 78 |
| Conread position: | 177-370 |
| Cow position: | chr18:4176883-4177081 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 50, 70 |
Show alignments to all cow chromosomes.