Cow genome map

Conread name: rnlu1834b_h15.y1

Conread position: 16-367
Cow position: chr2:66671250-66670891 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 25, 33

Conread position: 25-338
Cow position: chr2:29191980-29191655 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 77

Conread position: 25-370
Cow position: chr2:41778912-41779262 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 114

Conread position: 25-370
Cow position: chr2:81186060-81185714 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 71

Conread position: 25-401
Cow position: chr2:35971381-35971773 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 268
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 13, 28

Conread position: 38-354
Cow position: chr2:40853422-40853107 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 16

Conread position: 40-350
Cow position: chr2:68426997-68426685 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 16

Conread position: 63-243
Cow position: chr2:46204841-46205022 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 81

Conread position: 63-354
Cow position: chr2:45927636-45927930 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 18, 80

Conread position: 79-370
Cow position: chr2:69131076-69131380 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 43, 62

Conread position: 139-370
Cow position: chr2:46567012-46567246 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 42

Conread position: 141-361
Cow position: chr2:68157591-68157806 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 86, 104

Conread position: 142-329
Cow position: chr2:12565650-12565844 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 104

Conread position: 142-370
Cow position: chr2:21336525-21336297 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 81, 95

Conread position: 144-296
Cow position: chr2:20910372-20910218 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 102

Conread position: 144-296
Cow position: chr2:34292993-34292838 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 82, 103

Conread position: 144-328
Cow position: chr2:56300550-56300366 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 103

Conread position: 144-344
Cow position: chr2:15263612-15263813 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 104

Conread position: 144-344
Cow position: chr2:46565028-46565232 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 129, 100

Conread position: 144-349
Cow position: chr2:35453379-35453167 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 66, 103

Conread position: 144-354
Cow position: chr2:86326982-86327204 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 144-356
Cow position: chr2:3472373-3472582 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 96

Conread position: 144-360
Cow position: chr2:64657930-64658144 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 102

Conread position: 144-361
Cow position: chr2:43334785-43335002 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 101

Conread position: 144-361
Cow position: chr2:44683787-44683572 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 83, 103

Conread position: 144-363
Cow position: chr2:24508896-24508667 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 105

Conread position: 144-366
Cow position: chr2:12768096-12768317 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 102

Conread position: 144-367
Cow position: chr2:29418656-29418435 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 158

Conread position: 144-370
Cow position: chr2:25375839-25375609 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 83, 101

Conread position: 144-370
Cow position: chr2:37366168-37365937 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 58

Conread position: 144-370
Cow position: chr2:44972662-44972442 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 83, 63

Conread position: 144-385
Cow position: chr2:1479718-1479957 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 50

Conread position: 144-386
Cow position: chr2:7316832-7316591 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 89, 102

Conread position: 146-370
Cow position: chr2:85009930-85009705 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 81, 102

Conread position: 149-316
Cow position: chr2:19741263-19741098 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 98

Conread position: 149-323
Cow position: chr2:80804933-80805115 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 99

Conread position: 149-345
Cow position: chr2:12693245-12693052 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 98

Conread position: 149-345
Cow position: chr2:44546908-44546715 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 98

Conread position: 149-345
Cow position: chr2:82301419-82301612 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 98

Conread position: 149-349
Cow position: chr2:44979807-44980007 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 78, 98

Conread position: 149-380
Cow position: chr2:47149930-47150167 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 66, 95

Conread position: 149-385
Cow position: chr2:68349982-68349747 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 78, 98

Conread position: 149-386
Cow position: chr2:28916146-28915912 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 78, 98

Conread position: 150-275
Cow position: chr2:36417277-36417150 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 77, 97

Conread position: 150-297
Cow position: chr2:23043451-23043601 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 97

Conread position: 151-349
Cow position: chr2:82293705-82293900 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 96

Conread position: 152-295
Cow position: chr2:36855299-36855154 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 93

Conread position: 152-385
Cow position: chr2:33630671-33630904 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 97

Conread position: 154-370
Cow position: chr2:69133818-69134036 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 8, 93

Conread position: 156-329
Cow position: chr2:39255269-39255094 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 37

Conread position: 156-356
Cow position: chr2:40299675-40299875 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 91

Conread position: 156-358
Cow position: chr2:40021121-40021328 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 86

Conread position: 159-366
Cow position: chr2:7293367-7293154 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 89

Conread position: 159-366
Cow position: chr2:16800024-16800237 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 62, 89

Conread position: 159-366
Cow position: chr2:46772751-46772538 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 89

Conread position: 159-394
Cow position: chr2:41586119-41586358 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 63, 94

Conread position: 168-366
Cow position: chr2:70467939-70467743 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 86

Conread position: 189-362
Cow position: chr2:32892984-32893164 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 56

Conread position: 199-394
Cow position: chr2:39871617-39871416 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 79, 44

Conread position: 211-393
Cow position: chr2:45934471-45934661 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 0

Show alignments to all cow chromosomes.