Cow genome map
| Conread name: | rnlu1834b_h15.y1 |
| Conread position: | 16-370 |
| Cow position: | chr20:37059015-37059380 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 22, 135 |
| Conread position: | 37-271 |
| Cow position: | chr20:8964589-8964825 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 31, 117 |
| Conread position: | 37-370 |
| Cow position: | chr20:2226938-2227275 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 63-404 |
| Cow position: | chr20:25039209-25038868 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 66-370 |
| Cow position: | chr20:24340417-24340115 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 227 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 73-297 |
| Cow position: | chr20:13080190-13079961 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 77-363 |
| Cow position: | chr20:22412680-22412951 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 105-370 |
| Cow position: | chr20:8298091-8297827 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 123, 9 |
| Conread position: | 126-358 |
| Cow position: | chr20:33667723-33667491 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 8, 16 |
| Conread position: | 142-328 |
| Cow position: | chr20:13083274-13083471 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 85, 105 |
| Conread position: | 143-370 |
| Cow position: | chr20:13124839-13124600 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 84, 104 |
| Conread position: | 144-284 |
| Cow position: | chr20:31431125-31431264 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 144-329 |
| Cow position: | chr20:3077010-3077197 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 144-345 |
| Cow position: | chr20:1511801-1511599 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 72, 103 |
| Conread position: | 144-349 |
| Cow position: | chr20:17673974-17674182 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 106 |
| Conread position: | 144-366 |
| Cow position: | chr20:13282324-13282094 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 81, 103 |
| Conread position: | 144-366 |
| Cow position: | chr20:33711461-33711678 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 57 |
| Conread position: | 144-370 |
| Cow position: | chr20:33098161-33098395 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 144-382 |
| Cow position: | chr20:40527196-40527434 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 77, 111 |
| Conread position: | 147-297 |
| Cow position: | chr20:35962209-35962055 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 101 |
| Conread position: | 149-316 |
| Cow position: | chr20:3531986-3531821 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 71, 98 |
| Conread position: | 149-323 |
| Cow position: | chr20:28137748-28137577 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-370 |
| Cow position: | chr20:19030756-19030530 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 78, 99 |
| Conread position: | 149-371 |
| Cow position: | chr20:33773241-33773009 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 139 |
| Conread position: | 149-377 |
| Cow position: | chr20:38726504-38726282 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 185, 28 |
| Conread position: | 149-407 |
| Cow position: | chr20:36325889-36326153 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 69, 49 |
| Conread position: | 150-361 |
| Cow position: | chr20:35639491-35639702 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 72, 97 |
| Conread position: | 150-366 |
| Cow position: | chr20:10508374-10508152 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 150-395 |
| Cow position: | chr20:37910887-37911135 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 77, 97 |
| Conread position: | 154-358 |
| Cow position: | chr20:35181537-35181739 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 124, 90 |
| Conread position: | 163-385 |
| Cow position: | chr20:31439968-31440189 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 84 |
| Conread position: | 182-366 |
| Cow position: | chr20:14592033-14592227 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 35, 67 |
| Conread position: | 204-370 |
| Cow position: | chr20:22682108-22681939 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 48 |
Show alignments to all cow chromosomes.