Cow genome map
| Conread name: | rnlu1834b_h15.y1 |
| Conread position: | 38-273 |
| Cow position: | chr21:12208413-12208641 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 59-370 |
| Cow position: | chr21:8375452-8375757 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 63-323 |
| Cow position: | chr21:41070719-41070457 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 63-362 |
| Cow position: | chr21:28768508-28768204 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 19, 27 |
| Conread position: | 63-370 |
| Cow position: | chr21:21407555-21407868 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 66-349 |
| Cow position: | chr21:35322947-35322656 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 114-370 |
| Cow position: | chr21:20015960-20016220 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 45, 8 |
| Conread position: | 131-370 |
| Cow position: | chr21:17788069-17788321 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 92, 9 |
| Conread position: | 142-370 |
| Cow position: | chr21:18171736-18171966 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 85, 106 |
| Conread position: | 144-278 |
| Cow position: | chr21:18485700-18485836 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 79, 103 |
| Conread position: | 144-316 |
| Cow position: | chr21:41413236-41413408 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-333 |
| Cow position: | chr21:36667038-36667224 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 103 |
| Conread position: | 144-361 |
| Cow position: | chr21:14787314-14787527 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 144-361 |
| Cow position: | chr21:32404743-32404527 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 52 |
| Conread position: | 144-366 |
| Cow position: | chr21:19866762-19866982 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-366 |
| Cow position: | chr21:42853562-42853786 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 105 |
| Conread position: | 144-367 |
| Cow position: | chr21:36212069-36212288 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 144-370 |
| Cow position: | chr21:10556311-10556544 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 86, 109 |
| Conread position: | 144-370 |
| Cow position: | chr21:42179861-42179628 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-385 |
| Cow position: | chr21:6729362-6729119 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-400 |
| Cow position: | chr21:13861122-13860863 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 149-296 |
| Cow position: | chr21:23236632-23236784 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 149-349 |
| Cow position: | chr21:42227840-42228040 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 149-370 |
| Cow position: | chr21:7402630-7402854 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 78, 97 |
| Conread position: | 149-370 |
| Cow position: | chr21:19092481-19092696 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 150, 72 |
| Conread position: | 149-385 |
| Cow position: | chr21:24935764-24935529 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 84, 151 |
| Conread position: | 149-389 |
| Cow position: | chr21:40644691-40644930 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 152 |
| Conread position: | 159-394 |
| Cow position: | chr21:47962720-47962479 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 63, 89 |
| Conread position: | 171-370 |
| Cow position: | chr21:18571800-18572006 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 182-366 |
| Cow position: | chr21:41566112-41565919 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 35, 67 |
Show alignments to all cow chromosomes.