Cow genome map
| Conread name: | rnlu1834b_h15.y1 |
| Conread position: | 45-370 |
| Cow position: | chr22:27748253-27747916 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 247 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 63-370 |
| Cow position: | chr22:674749-674442 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 63-370 |
| Cow position: | chr22:18994045-18993733 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 103-393 |
| Cow position: | chr22:19093367-19093076 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 217 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 124, 37 |
| Conread position: | 116-309 |
| Cow position: | chr22:8133507-8133703 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 116, 24 |
| Conread position: | 129-358 |
| Cow position: | chr22:35530868-35531100 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 98, 11 |
| Conread position: | 142-344 |
| Cow position: | chr22:8121304-8121513 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 85, 105 |
| Conread position: | 142-367 |
| Cow position: | chr22:2002356-2002121 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 21, 107 |
| Conread position: | 144-296 |
| Cow position: | chr22:10627634-10627479 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-325 |
| Cow position: | chr22:17363201-17363389 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 76, 49 |
| Conread position: | 144-349 |
| Cow position: | chr22:13956317-13956521 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 83, 26 |
| Conread position: | 144-354 |
| Cow position: | chr22:18698458-18698675 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 107 |
| Conread position: | 144-366 |
| Cow position: | chr22:30912153-30911931 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 42, 109 |
| Conread position: | 144-366 |
| Cow position: | chr22:41501152-41501374 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-367 |
| Cow position: | chr22:17926466-17926694 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 84, 103 |
| Conread position: | 144-370 |
| Cow position: | chr22:6438083-6437854 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 144-371 |
| Cow position: | chr22:17310497-17310731 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 144-386 |
| Cow position: | chr22:41685182-41685426 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 78, 103 |
| Conread position: | 149-338 |
| Cow position: | chr22:8040703-8040889 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 151 |
| Conread position: | 149-345 |
| Cow position: | chr22:8033461-8033654 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 84, 151 |
| Conread position: | 149-348 |
| Cow position: | chr22:27076951-27076755 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 84, 151 |
| Conread position: | 149-363 |
| Cow position: | chr22:1610972-1610758 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 149-366 |
| Cow position: | chr22:31381268-31381483 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 79, 98 |
| Conread position: | 149-367 |
| Cow position: | chr22:19971092-19971317 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 78, 92 |
| Conread position: | 149-385 |
| Cow position: | chr22:302825-303064 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 74, 99 |
| Conread position: | 149-386 |
| Cow position: | chr22:2941761-2941997 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 85, 152 |
| Conread position: | 150-370 |
| Cow position: | chr22:2527214-2527436 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 91 |
| Conread position: | 151-353 |
| Cow position: | chr22:13928954-13928743 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 151-363 |
| Cow position: | chr22:6702832-6702612 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 102 |
| Conread position: | 151-393 |
| Cow position: | chr22:23842301-23842053 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 98 |
| Conread position: | 152-345 |
| Cow position: | chr22:744083-743892 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 148 |
| Conread position: | 158-370 |
| Cow position: | chr22:39459026-39459244 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 58, 95 |
| Conread position: | 167-370 |
| Cow position: | chr22:4997833-4998041 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 177-353 |
| Cow position: | chr22:12752628-12752811 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 78 |
| Conread position: | 182-366 |
| Cow position: | chr22:2377054-2376861 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 182-366 |
| Cow position: | chr22:3420958-3421151 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 185-380 |
| Cow position: | chr22:39503459-39503259 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 189-354 |
| Cow position: | chr22:42035552-42035728 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 87 |
| Conread position: | 195-370 |
| Cow position: | chr22:17874211-17874031 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 33, 57 |
Show alignments to all cow chromosomes.